Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC013268.1-206ENST00000638368 961 ntBASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC112229.1-201ENST00000639295 961 ntBASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 PTBP1P-201ENST00000554374 1601 ntBASIC16.56■□□□□ 0.24
TRBV6-7A0A0A0MS04 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC079598.2-202ENST00000546624 1451 ntBASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 NTF6G-201ENST00000591094 616 ntBASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC016405.3-201ENST00000607710 860 ntBASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC009237.14-201ENST00000609975 1594 ntBASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-7A0A0A0MS04 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 KRT18P11-201ENST00000435214 1283 ntBASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 AL049812.1-201ENST00000432563 2267 ntBASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-7A0A0A0MS04 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 KRT8P17-201ENST00000453110 1448 ntBASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.53■□□□□ 0.24
TRBV6-7A0A0A0MS04 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms