Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 DUX4L16-201ENST00000555130 1264 ntBASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 AL031963.3-201ENST00000606441 850 ntBASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 AC105020.6-201ENST00000621523 1217 ntBASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 BCL2-203ENST00000589955 5011 ntBASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV30A0A087WSZ9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 AC011767.1-201ENST00000617410 1153 ntBASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 BID-214ENST00000617586 542 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV30A0A087WSZ9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 AC006015.1-201ENST00000429970 570 ntBASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 OR10C1-204ENST00000622521 1039 ntBASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV30A0A087WSZ9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 AC007322.1-201ENST00000426983 750 ntBASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 CNN2P6-201ENST00000439038 900 ntBASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 CYP2T3P-201ENST00000601990 817 ntBASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 AL589743.5-201ENST00000616611 1050 ntBASIC15.52■□□□□ 0.08
TRAV30A0A087WSZ9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 AC009237.14-201ENST00000609975 1594 ntBASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV30A0A087WSZ9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms