Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 AL445238.1-204ENST00000400311 463 ntBASIC7.64□□□□□ -1.19
UPF2Q9HAU5 RN7SKP281-201ENST00000410472 352 ntBASIC7.64□□□□□ -1.19
UPF2Q9HAU5 CHCHD4P5-201ENST00000436684 427 ntBASIC7.64□□□□□ -1.19
UPF2Q9HAU5 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 SETP4-201ENST00000455717 868 ntBASIC7.64□□□□□ -1.19
UPF2Q9HAU5 AC008945.1-201ENST00000505144 499 ntBASIC7.64□□□□□ -1.19
UPF2Q9HAU5 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 MIR4312-201ENST00000579909 76 ntBASIC7.64□□□□□ -1.19
UPF2Q9HAU5 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 AC093297.3-201ENST00000607056 2517 ntBASIC7.64□□□□□ -1.19
UPF2Q9HAU5 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC7.64□□□□□ -1.19
UPF2Q9HAU5 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AL359955.1-201ENST00000455242 3275 ntBASIC7.63□□□□□ -1.19
UPF2Q9HAU5 U3.52-201ENST00000384034 216 ntBASIC7.63□□□□□ -1.19
UPF2Q9HAU5 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 RN7SKP91-201ENST00000410852 288 ntBASIC7.63□□□□□ -1.19
UPF2Q9HAU5 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AC009303.1-201ENST00000426307 352 ntBASIC7.63□□□□□ -1.19
UPF2Q9HAU5 MED28P4-201ENST00000433137 572 ntBASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 RAB28P2-201ENST00000454299 641 ntBASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 RPL7L1P7-201ENST00000509986 724 ntBASIC7.63□□□□□ -1.19
UPF2Q9HAU5 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AC023968.1-201ENST00000560719 475 ntBASIC7.63□□□□□ -1.19
UPF2Q9HAU5 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AC092718.4-201ENST00000566639 716 ntBASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AC015799.1-201ENST00000622996 3122 ntBASIC7.63□□□□□ -1.19
UPF2Q9HAU5 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 SAMMSON-210ENST00000641260 1308 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AL359091.1-201ENST00000449048 1734 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 RNA5SP382-201ENST00000363355 112 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AL121977.1-201ENST00000401636 979 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 RN7SKP39-201ENST00000410773 322 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AC092651.1-201ENST00000426110 312 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 RPL6P24-201ENST00000445338 864 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 PCMTD1P3-201ENST00000451824 472 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 RANP2-201ENST00000456833 229 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 RPL7AP30-201ENST00000482859 796 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AF305872.1-201ENST00000485217 471 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 RN7SL714P-201ENST00000487050 298 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AC027229.1-201ENST00000583887 253 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 MIR132-201ENST00000591554 101 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AC004805.3-201ENST00000603178 310 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AL049829.3-202ENST00000604278 711 ntBASIC7.62□□□□□ -1.19
UPF2Q9HAU5 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms