Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MAPK10-344ENST00000641718 3746 ntBASIC7.6□□□□□ -1.19
SNED1Q8TER0 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.6□□□□□ -1.19
SNED1Q8TER0 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNED1Q8TER0 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNED1Q8TER0 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SNED1Q8TER0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.6□□□□□ -1.19
SNED1Q8TER0 AC024651.2-201ENST00000562480 2098 ntBASIC7.6□□□□□ -1.19
SNED1Q8TER0 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNED1Q8TER0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.6□□□□□ -1.19
SNED1Q8TER0 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC7.6□□□□□ -1.19
SNED1Q8TER0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNED1Q8TER0 FUNDC2P3-201ENST00000334716 533 ntBASIC7.6□□□□□ -1.19
SNED1Q8TER0 RNA5SP132-201ENST00000364725 118 ntBASIC7.6□□□□□ -1.19
SNED1Q8TER0 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.6□□□□□ -1.19
SNED1Q8TER0 AL512593.1-201ENST00000444758 779 ntBASIC7.6□□□□□ -1.19
SNED1Q8TER0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.6□□□□□ -1.19
SNED1Q8TER0 MYO5BP2-201ENST00000449815 1277 ntBASIC7.6□□□□□ -1.19
SNED1Q8TER0 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNED1Q8TER0 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.6□□□□□ -1.19
SNED1Q8TER0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.6□□□□□ -1.19
SNED1Q8TER0 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.6□□□□□ -1.19
SNED1Q8TER0 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.6□□□□□ -1.19
SNED1Q8TER0 AL021707.7-201ENST00000607991 416 ntBASIC7.6□□□□□ -1.19
SNED1Q8TER0 AC018445.2-201ENST00000622987 260 ntBASIC7.6□□□□□ -1.19
SNED1Q8TER0 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SNED1Q8TER0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 SNORA64.1-201ENST00000362600 132 ntBASIC7.59□□□□□ -1.19
SNED1Q8TER0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 OR7E101P-201ENST00000400428 513 ntBASIC7.59□□□□□ -1.19
SNED1Q8TER0 AC245060.4-201ENST00000413293 1121 ntBASIC7.59□□□□□ -1.19
SNED1Q8TER0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SNED1Q8TER0 SEPT14P12-201ENST00000442280 560 ntBASIC7.59□□□□□ -1.19
SNED1Q8TER0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 MORF4-201ENST00000447135 971 ntBASIC7.59□□□□□ -1.19
SNED1Q8TER0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 SNX18P26-201ENST00000458433 740 ntBASIC7.59□□□□□ -1.19
SNED1Q8TER0 Y_RNA.710-201ENST00000516975 110 ntBASIC7.59□□□□□ -1.19
SNED1Q8TER0 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 AC005244.1-201ENST00000582566 339 ntBASIC7.59□□□□□ -1.19
SNED1Q8TER0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 AL357562.1-201ENST00000624911 609 ntBASIC7.59□□□□□ -1.19
SNED1Q8TER0 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
SNED1Q8TER0 Z93929.1-201ENST00000418200 1475 ntBASIC7.59□□□□□ -1.19
SNED1Q8TER0 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.59□□□□□ -1.2
SNED1Q8TER0 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
SNED1Q8TER0 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.59□□□□□ -1.2
SNED1Q8TER0 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
SNED1Q8TER0 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNED1Q8TER0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNED1Q8TER0 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNED1Q8TER0 AC104581.5-201ENST00000624171 7141 ntBASIC7.58□□□□□ -1.2
SNED1Q8TER0 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNED1Q8TER0 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNED1Q8TER0 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNED1Q8TER0 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNED1Q8TER0 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNED1Q8TER0 OR9K1P-201ENST00000326513 941 ntBASIC7.58□□□□□ -1.2
SNED1Q8TER0 RPS14P4-201ENST00000415880 418 ntBASIC7.58□□□□□ -1.2
SNED1Q8TER0 AL513325.1-201ENST00000417716 1034 ntBASIC7.58□□□□□ -1.2
SNED1Q8TER0 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SNED1Q8TER0 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.58□□□□□ -1.2
SNED1Q8TER0 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
SNED1Q8TER0 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 AC106872.5-201ENST00000508856 1416 ntBASIC7.57□□□□□ -1.2
SNED1Q8TER0 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SNED1Q8TER0 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms