Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AL022319.1-201ENST00000458183 1167 ntBASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 RPS7P11-201ENST00000484240 586 ntBASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AC093664.1-201ENST00000511779 289 ntBASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 RNA5SP116-201ENST00000516132 98 ntBASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 IGHV4-55-201ENST00000520889 368 ntBASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AC027796.1-201ENST00000575593 512 ntBASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AC006924.1-201ENST00000610750 559 ntBASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 MIR6503-201ENST00000622884 86 ntBASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AC018659.2-201ENST00000624690 715 ntBASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 AC068213.1-201ENST00000625124 226 ntBASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.49□□□□□ -1.37
CDKL3Q8IVW4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AC068769.1-201ENST00000474767 2426 ntBASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AC137056.2-201ENST00000624055 1958 ntBASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 MRPS21P3-201ENST00000436696 262 ntBASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 RPS27AP3-201ENST00000453803 454 ntBASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 RN7SKP248-201ENST00000516278 305 ntBASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AC131935.1-201ENST00000524621 333 ntBASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AP001804.1-201ENST00000526868 919 ntBASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AL589863.1-201ENST00000595383 631 ntBASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 MIR6883-201ENST00000614952 78 ntBASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 AC116667.2-201ENST00000641075 823 ntBASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDKL3Q8IVW4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 OFD1P17-201ENST00000437639 3018 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 BX284613.1-201ENST00000452221 1641 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 RN7SKP257-201ENST00000364525 309 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 SNORD94-201ENST00000386037 137 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 AL445238.1-204ENST00000400311 463 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 AL451046.1-201ENST00000406097 534 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 AL451063.1-201ENST00000450164 1133 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 AL034369.1-201ENST00000453808 477 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 RPL7L1P3-201ENST00000455249 689 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 RN7SL643P-201ENST00000471845 291 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 AP003385.3-201ENST00000472498 287 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 AC018639.1-201ENST00000492994 442 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 RNA5SP418-201ENST00000515951 117 ntBASIC6.47□□□□□ -1.37
CDKL3Q8IVW4 RPA2P3-201ENST00000533268 770 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms