Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ZNF131-209ENST00000507393 583 ntTSL 46.03□□□□□ -1.445e-7■□□□□ 8.8
PRPF8Q6P2Q9 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC5.64□□□□□ -1.515e-7■□□□□ 8.8
PRPF8Q6P2Q9 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.05□□□□□ -1.65e-7■□□□□ 8.8
PRPF8Q6P2Q9 WAC-214ENST00000476046 523 ntTSL 20.01□□□□□ -2.415e-7■□□□□ 8.8
PRPF8Q6P2Q9 TMEM9-210ENST00000495205 971 ntTSL 510.69□□□□□ -0.75e-6■□□□□ 8.8
PRPF8Q6P2Q9 TMEM9-207ENST00000455367 487 ntTSL 59.45□□□□□ -0.95e-6■□□□□ 8.8
PRPF8Q6P2Q9 MXD4-202ENST00000510822 561 ntTSL 314.27□□□□□ -0.131e-14■□□□□ 8.8
PRPF8Q6P2Q9 MXD4-205ENST00000515378 522 ntTSL 212.95□□□□□ -0.341e-14■□□□□ 8.8
PRPF8Q6P2Q9 FOXK2-208ENST00000571160 496 ntTSL 511.14□□□□□ -0.638e-15■□□□□ 8.8
PRPF8Q6P2Q9 CYTH2-201ENST00000325139 1087 ntTSL 221.53■■□□□ 1.042e-7■□□□□ 8.8
PRPF8Q6P2Q9 CYTH2-205ENST00000460595 1026 ntTSL 312.78□□□□□ -0.362e-7■□□□□ 8.8
PRPF8Q6P2Q9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.011e-7■□□□□ 8.8
PRPF8Q6P2Q9 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC9.34□□□□□ -0.911e-7■□□□□ 8.8
PRPF8Q6P2Q9 OGT-203ENST00000444774 556 ntTSL 49.06□□□□□ -0.965e-19■□□□□ 8.8
PRPF8Q6P2Q9 EVA1A-209ENST00000486489 524 ntTSL 216.7■□□□□ 0.262e-12■□□□□ 8.8
PRPF8Q6P2Q9 TFR2-203ENST00000461176 692 ntTSL 315.01□□□□□ -0.015e-9■□□□□ 8.8
PRPF8Q6P2Q9 SOAT2-203ENST00000551896 570 ntTSL 213.17□□□□□ -0.35e-9■□□□□ 8.8
PRPF8Q6P2Q9 ERBB3-220ENST00000552691 291 ntTSL 33.59□□□□□ -1.845e-9■□□□□ 8.8
PRPF8Q6P2Q9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.08■□□□□ 0.163e-7■□□□□ 8.8
PRPF8Q6P2Q9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.033e-7■□□□□ 8.8
PRPF8Q6P2Q9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.72□□□□□ -0.053e-7■□□□□ 8.8
PRPF8Q6P2Q9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.74□□□□□ -0.373e-7■□□□□ 8.8
PRPF8Q6P2Q9 SH3GLB2-211ENST00000479237 2794 ntTSL 1 (best)12.08□□□□□ -0.488e-7■□□□□ 8.8
PRPF8Q6P2Q9 SH3GLB2-209ENST00000461811 4828 ntTSL 1 (best)11.23□□□□□ -0.618e-7■□□□□ 8.8
PRPF8Q6P2Q9 CPNE7-207ENST00000564421 517 ntTSL 314.44□□□□□ -0.12e-10■□□□□ 8.8
PRPF8Q6P2Q9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.399e-7■□□□□ 8.8
PRPF8Q6P2Q9 ATG101-203ENST00000548915 658 ntTSL 316.54■□□□□ 0.249e-7■□□□□ 8.8
PRPF8Q6P2Q9 ATG101-204ENST00000550604 671 ntTSL 316.45■□□□□ 0.229e-7■□□□□ 8.8
PRPF8Q6P2Q9 ATG101-206ENST00000552947 1312 ntTSL 1 (best)14.38□□□□□ -0.119e-7■□□□□ 8.8
PRPF8Q6P2Q9 ATG101-207ENST00000553049 846 ntTSL 214.29□□□□□ -0.129e-7■□□□□ 8.8
PRPF8Q6P2Q9 ATG101-205ENST00000552544 837 ntTSL 213.98□□□□□ -0.179e-7■□□□□ 8.8
PRPF8Q6P2Q9 ZNF286A-220ENST00000585207 582 ntTSL 212.02□□□□□ -0.499e-7■□□□□ 8.8
PRPF8Q6P2Q9 ZNF286A-217ENST00000583347 504 ntTSL 511.3□□□□□ -0.69e-7■□□□□ 8.8
PRPF8Q6P2Q9 MBTPS1-208ENST00000564444 535 ntTSL 416.33■□□□□ 0.21e-6■□□□□ 8.8
PRPF8Q6P2Q9 MBTPS1-211ENST00000567557 549 ntTSL 415.44■□□□□ 0.061e-6■□□□□ 8.8
PRPF8Q6P2Q9 MBTPS1-214ENST00000569907 587 ntTSL 414.73□□□□□ -0.051e-6■□□□□ 8.8
PRPF8Q6P2Q9 PXN-217ENST00000550795 513 ntTSL 320.81■□□□□ 0.929e-8■□□□□ 8.8
PRPF8Q6P2Q9 PXN-222ENST00000637624 4132 ntTSL 210.21□□□□□ -0.789e-8■□□□□ 8.8
PRPF8Q6P2Q9 MAPKAPK2-204ENST00000493447 241 ntTSL 310.1□□□□□ -0.799e-8■□□□□ 8.8
PRPF8Q6P2Q9 SEPT5-213ENST00000477238 577 ntTSL 414.81□□□□□ -0.041e-6■□□□□ 8.8
PRPF8Q6P2Q9 SEPT5-202ENST00000395109 794 ntTSL 210.96□□□□□ -0.651e-6■□□□□ 8.8
PRPF8Q6P2Q9 SLC17A9-206ENST00000487303 507 ntTSL 214.25□□□□□ -0.131e-323■□□□□ 8.8
PRPF8Q6P2Q9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.72■□□□□ 0.593e-7■□□□□ 8.7
PRPF8Q6P2Q9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.353e-7■□□□□ 8.7
PRPF8Q6P2Q9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.253e-7■□□□□ 8.7
PRPF8Q6P2Q9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.33e-7■□□□□ 8.7
PRPF8Q6P2Q9 TMEM51-206ENST00000451326 766 ntTSL 312.43□□□□□ -0.423e-7■□□□□ 8.7
PRPF8Q6P2Q9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.36□□□□□ -0.431e-6■□□□□ 8.7
PRPF8Q6P2Q9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.453e-7■□□□□ 8.7
PRPF8Q6P2Q9 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC11.02□□□□□ -0.641e-6■□□□□ 8.7
PRPF8Q6P2Q9 AC009053.1-202ENST00000563377 2051 ntBASIC6.62□□□□□ -1.351e-6■□□□□ 8.7
PRPF8Q6P2Q9 STK35-202ENST00000493263 1595 ntTSL 1 (best)16.91■□□□□ 0.31e-7■□□□□ 8.7
PRPF8Q6P2Q9 CYP21A1P-202ENST00000354927 1481 ntBASIC16.84■□□□□ 0.291e-7■□□□□ 8.7
PRPF8Q6P2Q9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.42■□□□□ 0.061e-7■□□□□ 8.7
PRPF8Q6P2Q9 PCSK6-210ENST00000559499 3325 ntTSL 212.73□□□□□ -0.371e-7■□□□□ 8.7
PRPF8Q6P2Q9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.451e-7■□□□□ 8.7
PRPF8Q6P2Q9 PHGDH-205ENST00000482968 1754 ntTSL 212.23□□□□□ -0.451e-7■□□□□ 8.7
PRPF8Q6P2Q9 SSUH2-214ENST00000484585 554 ntTSL 411.23□□□□□ -0.612e-7■□□□□ 8.7
PRPF8Q6P2Q9 PCSK6-209ENST00000559430 338 ntTSL 311.2□□□□□ -0.621e-7■□□□□ 8.7
PRPF8Q6P2Q9 GSTTP1-202ENST00000612717 1788 ntTSL 510.7□□□□□ -0.71e-7■□□□□ 8.7
PRPF8Q6P2Q9 SSUH2-213ENST00000483845 482 ntTSL 310.49□□□□□ -0.732e-7■□□□□ 8.7
PRPF8Q6P2Q9 SSUH2-210ENST00000466215 492 ntTSL 39.83□□□□□ -0.842e-7■□□□□ 8.7
PRPF8Q6P2Q9 COL27A1-204ENST00000477421 3991 ntTSL 29.55□□□□□ -0.883e-14■□□□□ 8.7
PRPF8Q6P2Q9 GSTTP1-203ENST00000617532 449 ntTSL 1 (best)8.58□□□□□ -1.041e-7■□□□□ 8.7
PRPF8Q6P2Q9 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.131e-7■□□□□ 8.7
PRPF8Q6P2Q9 GSTTP1-201ENST00000611600 721 ntTSL 1 (best)5.13□□□□□ -1.591e-7■□□□□ 8.7
PRPF8Q6P2Q9 CPNE1-227ENST00000498056 362 ntTSL 211.32□□□□□ -0.63e-10■□□□□ 8.7
PRPF8Q6P2Q9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.112e-11■□□□□ 8.7
PRPF8Q6P2Q9 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC8.7□□□□□ -1.022e-11■□□□□ 8.7
PRPF8Q6P2Q9 RAB5A-205ENST00000446547 1358 ntTSL 1 (best)4.14□□□□□ -1.752e-11■□□□□ 8.7
PRPF8Q6P2Q9 RAB5A-206ENST00000469122 918 ntTSL 22.39□□□□□ -2.032e-11■□□□□ 8.7
PRPF8Q6P2Q9 RAB5A-207ENST00000473608 868 ntTSL 2-0.26□□□□□ -2.452e-11■□□□□ 8.7
PRPF8Q6P2Q9 CHPT1-202ENST00000546490 476 ntTSL 216.28■□□□□ 0.26e-10■□□□□ 8.7
PRPF8Q6P2Q9 ITGA5-203ENST00000547197 757 ntTSL 312.49□□□□□ -0.413e-7■□□□□ 8.7
PRPF8Q6P2Q9 ITGA5-209ENST00000552387 1333 ntTSL 29.55□□□□□ -0.883e-7■□□□□ 8.7
PRPF8Q6P2Q9 ITGA5-210ENST00000552431 588 ntTSL 39.02□□□□□ -0.973e-7■□□□□ 8.7
PRPF8Q6P2Q9 ANPEP-206ENST00000559887 534 ntTSL 410.44□□□□□ -0.742e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-211ENST00000484104 725 ntTSL 217.3■□□□□ 0.368e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-214ENST00000493924 1573 ntTSL 516.74■□□□□ 0.278e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-210ENST00000483227 886 ntTSL 1 (best)16.72■□□□□ 0.278e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-205ENST00000437313 734 ntTSL 516.71■□□□□ 0.278e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-209ENST00000479508 741 ntTSL 216.71■□□□□ 0.278e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-216ENST00000498313 988 ntTSL 515.86■□□□□ 0.138e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-215ENST00000493948 641 ntTSL 315.7■□□□□ 0.18e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.018e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15□□□□□ -0.018e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-206ENST00000446063 1262 ntTSL 1 (best)13.91□□□□□ -0.188e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.328e-7■□□□□ 8.7
PRPF8Q6P2Q9 TSPAN32-208ENST00000461200 3325 ntTSL 211.7□□□□□ -0.548e-7■□□□□ 8.7
PRPF8Q6P2Q9 STC2-204ENST00000520593 566 ntTSL 411.21□□□□□ -0.626e-13■□□□□ 8.7
PRPF8Q6P2Q9 ZC3H3-202ENST00000528401 546 ntTSL 315.25■□□□□ 0.036e-13■□□□□ 8.7
PRPF8Q6P2Q9 HDLBP-243ENST00000488923 582 ntTSL 24.96□□□□□ -1.616e-13■□□□□ 8.7
PRPF8Q6P2Q9 ARID1B-225ENST00000637532 445 ntTSL 59.28□□□□□ -0.927e-7■□□□□ 8.7
PRPF8Q6P2Q9 NRBP2-205ENST00000530123 925 ntTSL 1 (best)20.67■□□□□ 0.91e-11■□□□□ 8.7
PRPF8Q6P2Q9 APBB2-218ENST00000509475 1486 ntTSL 216.02■□□□□ 0.151e-6■□□□□ 8.7
PRPF8Q6P2Q9 NRBP2-203ENST00000527545 2546 ntTSL 215.1■□□□□ 0.011e-11■□□□□ 8.7
PRPF8Q6P2Q9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.87□□□□□ -0.031e-6■□□□□ 8.7
PRPF8Q6P2Q9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.151e-6■□□□□ 8.7
PRPF8Q6P2Q9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.98□□□□□ -0.171e-6■□□□□ 8.7
PRPF8Q6P2Q9 APBB2-223ENST00000512510 539 ntTSL 513.84□□□□□ -0.191e-6■□□□□ 8.7
Retrieved 100 of 73,762 protein–RNA pairs in 3940.6 ms