RNA–Protein interactions for RNA: ENST00000473608.1

RAB5A-207, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 868 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-207ENST00000473608 AEBP2Q6ZN18 517 aaPredicted RBP29.05■■■□□ 2.24
RAB5A-207ENST00000473608 CHIC1Q5VXU3 224 aa27.25■■□□□ 1.95
RAB5A-207ENST00000473608 SENP3Q9H4L4 574 aaPredicted RBP24.96■■□□□ 1.59
RAB5A-207ENST00000473608 PHF23Q9BUL5 403 aaPredicted RBP24.53■■□□□ 1.52
RAB5A-207ENST00000473608 FOXD1Q16676 465 aa23.27■■□□□ 1.32
RAB5A-207ENST00000473608 POTEDQ86YR6 584 aa22.38■■□□□ 1.17
RAB5A-207ENST00000473608 MSH5O43196 834 aa22.06■■□□□ 1.12
RAB5A-207ENST00000473608 PIAS4Q8N2W9 510 aaPredicted RBP21.66■■□□□ 1.06
RAB5A-207ENST00000473608 PLPPR3Q6T4P5 718 aa21.47■■□□□ 1.03
RAB5A-207ENST00000473608 PPP6R1Q9UPN7 881 aa21.33■■□□□ 1.01
RAB5A-207ENST00000473608 ADRA2BP18089 450 aa21.24■□□□□ 0.99
RAB5A-207ENST00000473608 DMRT2Q9Y5R5 561 aa19.68■□□□□ 0.74
RAB5A-207ENST00000473608 MAPK8IP2Q13387 824 aaPredicted RBP19.66■□□□□ 0.74
RAB5A-207ENST00000473608 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
RAB5A-207ENST00000473608 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
RAB5A-207ENST00000473608 DCAF8L1A6NGE4 600 aa18.94■□□□□ 0.62
RAB5A-207ENST00000473608 HOXD11P31277 338 aaPredicted RBP18.75■□□□□ 0.59
RAB5A-207ENST00000473608 PPP4R3CPQ6ZMV5 832 aa18.73■□□□□ 0.59
RAB5A-207ENST00000473608 RNF39Q9H2S5 420 aa18.72■□□□□ 0.59
RAB5A-207ENST00000473608 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
RAB5A-207ENST00000473608 RNF216Q9NWF9 866 aaPredicted RBP18.48■□□□□ 0.55
RAB5A-207ENST00000473608 C1QBPQ07021 282 aaKnown RBP18.46■□□□□ 0.55
RAB5A-207ENST00000473608 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
RAB5A-207ENST00000473608 NCBP3Q53F19 620 aaKnown RBP17.91■□□□□ 0.46
RAB5A-207ENST00000473608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.46
RAB5A-207ENST00000473608 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
RAB5A-207ENST00000473608 POTEHQ6S545 545 aa17.46■□□□□ 0.39
RAB5A-207ENST00000473608 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
RAB5A-207ENST00000473608 CAPN15O75808 1086 aa17.36■□□□□ 0.37
RAB5A-207ENST00000473608 DSG3P32926 999 aa17.35■□□□□ 0.37
RAB5A-207ENST00000473608 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
RAB5A-207ENST00000473608 APLP2Q06481 763 aa16.98■□□□□ 0.31
RAB5A-207ENST00000473608 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
RAB5A-207ENST00000473608 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
RAB5A-207ENST00000473608 ABCB7O75027 752 aa16.89■□□□□ 0.29
RAB5A-207ENST00000473608 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
RAB5A-207ENST00000473608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.82■□□□□ 0.28
RAB5A-207ENST00000473608 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
RAB5A-207ENST00000473608 KCNA4P22459 653 aa16.74■□□□□ 0.27
RAB5A-207ENST00000473608 SAMD1Q6SPF0 538 aaPredicted RBP16.68■□□□□ 0.26
RAB5A-207ENST00000473608 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
RAB5A-207ENST00000473608 CHRDL2Q6WN34 429 aa16.45■□□□□ 0.22
RAB5A-207ENST00000473608 POLA2Q14181 598 aa16.37■□□□□ 0.21
RAB5A-207ENST00000473608 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
RAB5A-207ENST00000473608 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
RAB5A-207ENST00000473608 SP7Q8TDD2 431 aaPredicted RBP16.11■□□□□ 0.17
RAB5A-207ENST00000473608 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
RAB5A-207ENST00000473608 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
RAB5A-207ENST00000473608 PIP4P2Q8N4L2 257 aa15.92■□□□□ 0.14
RAB5A-207ENST00000473608 ATF5Q9Y2D1 282 aaPredicted RBP15.89■□□□□ 0.13
RAB5A-207ENST00000473608 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
RAB5A-207ENST00000473608 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
RAB5A-207ENST00000473608 HAX1O00165 279 aa15.82■□□□□ 0.12
RAB5A-207ENST00000473608 PITPNM1O00562 1244 aa15.76■□□□□ 0.11
RAB5A-207ENST00000473608 FXR2P51116 673 aaKnown RBP eCLIP15.74■□□□□ 0.11
RAB5A-207ENST00000473608 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
RAB5A-207ENST00000473608 EVX2Q03828 476 aa15.5■□□□□ 0.07
RAB5A-207ENST00000473608 SPDYE2BA6NHP3 402 aa15.48■□□□□ 0.07
RAB5A-207ENST00000473608 SPDYE6P0CI01 402 aa15.48■□□□□ 0.07
RAB5A-207ENST00000473608 SPDYE2Q495Y8 402 aa15.48■□□□□ 0.07
RAB5A-207ENST00000473608 ATXN8OSP0DMR3 200 aa15.42■□□□□ 0.06
RAB5A-207ENST00000473608 FBLN2P98095 1184 aa15.42■□□□□ 0.06
RAB5A-207ENST00000473608 PRKAR2AP13861 404 aaKnown RBP15.37■□□□□ 0.05
RAB5A-207ENST00000473608 SPDYE1Q8NFV5 336 aaPredicted RBP15.35■□□□□ 0.05
RAB5A-207ENST00000473608 ZBTB22O15209 634 aa15.34■□□□□ 0.05
RAB5A-207ENST00000473608 CLEC11AQ9Y240 323 aa15.34■□□□□ 0.05
RAB5A-207ENST00000473608 C19orf67A6NJJ6 358 aa15.26■□□□□ 0.03
RAB5A-207ENST00000473608 ZNF692Q9BU19 519 aaPredicted RBP15.21■□□□□ 0.03
RAB5A-207ENST00000473608 GABBR2O75899 941 aa15.17■□□□□ 0.02
RAB5A-207ENST00000473608 SSUH2Q9Y2M2 353 aa15.17■□□□□ 0.02
RAB5A-207ENST00000473608 MKRN4PQ13434 485 aaPredicted RBP15.13■□□□□ 0.01
RAB5A-207ENST00000473608 LHX8Q68G74 356 aa15.12■□□□□ 0.01
RAB5A-207ENST00000473608 CHADLQ6NUI6 762 aa15.06■□□□□ 0
RAB5A-207ENST00000473608 PRR29P0C7W0 189 aa15.02■□□□□ -0
RAB5A-207ENST00000473608 PABPN1Q86U42 306 aaKnown RBP eCLIP14.94□□□□□ -0.02
RAB5A-207ENST00000473608 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
RAB5A-207ENST00000473608 CLCN6P51797 869 aa14.83□□□□□ -0.04
RAB5A-207ENST00000473608 FARP1Q9Y4F1 1045 aaPredicted RBP14.81□□□□□ -0.04
RAB5A-207ENST00000473608 POTEIP0CG38 1075 aa14.8□□□□□ -0.04
RAB5A-207ENST00000473608 DCBLD2Q96PD2 775 aa14.71□□□□□ -0.05
RAB5A-207ENST00000473608 PLSCR2Q9NRY7 297 aa14.61□□□□□ -0.07
RAB5A-207ENST00000473608 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
RAB5A-207ENST00000473608 ZRANB1Q9UGI0 708 aa14.57□□□□□ -0.08
RAB5A-207ENST00000473608 STAG3Q9UJ98 1225 aa14.48□□□□□ -0.09
RAB5A-207ENST00000473608 CREBZFQ9NS37 354 aa14.47□□□□□ -0.09
RAB5A-207ENST00000473608 GALR2O43603 387 aaPredicted RBP14.43□□□□□ -0.1
RAB5A-207ENST00000473608 PAK3O75914 559 aaPredicted RBP14.39□□□□□ -0.11
RAB5A-207ENST00000473608 OTUD5Q96G74 571 aa14.38□□□□□ -0.11
RAB5A-207ENST00000473608 POTEB2H3BUK9 544 aa14.3□□□□□ -0.12
RAB5A-207ENST00000473608 PHF12Q96QT6 1004 aa14.28□□□□□ -0.12
RAB5A-207ENST00000473608 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
RAB5A-207ENST00000473608 POTEMA6NI47 508 aa14.25□□□□□ -0.13
RAB5A-207ENST00000473608 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
RAB5A-207ENST00000473608 POTEGQ6S5H5 508 aa14.19□□□□□ -0.14
RAB5A-207ENST00000473608 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
RAB5A-207ENST00000473608 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
RAB5A-207ENST00000473608 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
RAB5A-207ENST00000473608 METRNQ9UJH8 293 aa14.12□□□□□ -0.15
RAB5A-207ENST00000473608 ASTLQ6HA08 431 aaPredicted RBP14.11□□□□□ -0.15
RAB5A-207ENST00000473608 SLC39A7Q92504 469 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms