Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 HSPE1P2-201ENST00000554777 306 ntBASIC6.6□□□□□ -1.35
HTTP42858 NMNAT1P5-201ENST00000559657 841 ntBASIC6.6□□□□□ -1.35
HTTP42858 AC010327.2-201ENST00000587647 488 ntBASIC6.6□□□□□ -1.35
HTTP42858 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
HTTP42858 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 AC130365.1-201ENST00000530524 1553 ntBASIC6.6□□□□□ -1.35
HTTP42858 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HTTP42858 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HTTP42858 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
HTTP42858 RNA5SP30-201ENST00000365552 115 ntBASIC6.59□□□□□ -1.35
HTTP42858 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.59□□□□□ -1.35
HTTP42858 AC093267.1-201ENST00000489176 961 ntBASIC6.59□□□□□ -1.35
HTTP42858 RNU4ATAC-201ENST00000580972 127 ntBASIC6.59□□□□□ -1.35
HTTP42858 MIR4480-201ENST00000582492 71 ntBASIC6.59□□□□□ -1.35
HTTP42858 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC6.59□□□□□ -1.35
HTTP42858 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HTTP42858 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HTTP42858 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HTTP42858 AFAP1-202ENST00000360265 7479 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
HTTP42858 ACAN-208ENST00000561243 7593 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
HTTP42858 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC6.59□□□□□ -1.35
HTTP42858 AL360271.1-201ENST00000395679 510 ntBASIC6.59□□□□□ -1.35
HTTP42858 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.59□□□□□ -1.35
HTTP42858 BX119917.1-201ENST00000432517 502 ntBASIC6.59□□□□□ -1.35
HTTP42858 AL353796.1-201ENST00000561542 3241 ntBASIC6.59□□□□□ -1.35
HTTP42858 MIR4646-201ENST00000580775 63 ntBASIC6.59□□□□□ -1.35
HTTP42858 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.59□□□□□ -1.35
HTTP42858 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HTTP42858 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HTTP42858 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HTTP42858 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HTTP42858 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HTTP42858 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HTTP42858 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.59□□□□□ -1.35
HTTP42858 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC6.59□□□□□ -1.35
HTTP42858 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.59□□□□□ -1.35
HTTP42858 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HTTP42858 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.59□□□□□ -1.35
HTTP42858 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
HTTP42858 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.36
HTTP42858 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
HTTP42858 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
HTTP42858 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.59□□□□□ -1.36
HTTP42858 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
HTTP42858 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.59□□□□□ -1.36
HTTP42858 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.59□□□□□ -1.36
HTTP42858 RPS15AP30-201ENST00000420976 390 ntBASIC6.59□□□□□ -1.36
HTTP42858 AC114728.1-201ENST00000488289 483 ntBASIC6.59□□□□□ -1.36
HTTP42858 PRELID3BP5-201ENST00000508612 460 ntBASIC6.59□□□□□ -1.36
HTTP42858 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 AC025809.2-201ENST00000625085 1802 ntBASIC6.58□□□□□ -1.36
HTTP42858 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HTTP42858 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 AC008957.3-201ENST00000624112 2242 ntBASIC6.58□□□□□ -1.36
HTTP42858 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HTTP42858 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HTTP42858 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HTTP42858 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.58□□□□□ -1.36
HTTP42858 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.58□□□□□ -1.36
HTTP42858 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.58□□□□□ -1.36
HTTP42858 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.58□□□□□ -1.36
HTTP42858 STRADBP1-201ENST00000478954 1281 ntBASIC6.58□□□□□ -1.36
HTTP42858 RN7SL97P-201ENST00000486780 299 ntBASIC6.58□□□□□ -1.36
HTTP42858 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.58□□□□□ -1.36
HTTP42858 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.58□□□□□ -1.36
HTTP42858 AC022832.1-201ENST00000530718 645 ntBASIC6.58□□□□□ -1.36
HTTP42858 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.58□□□□□ -1.36
HTTP42858 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
HTTP42858 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.58□□□□□ -1.36
HTTP42858 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
HTTP42858 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HTTP42858 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 ENPEP-201ENST00000265162 6943 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HTTP42858 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.58□□□□□ -1.36
HTTP42858 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HTTP42858 MIR192-201ENST00000384915 110 ntBASIC6.58□□□□□ -1.36
HTTP42858 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.58□□□□□ -1.36
HTTP42858 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms