Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AF186996.2-201ENST00000508347 907 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC8.77□□□□□ -1.01
COL9A1P20849 RNU7-179P-201ENST00000516608 68 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC8.77□□□□□ -1.01
COL9A1P20849 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.77□□□□□ -1.01
COL9A1P20849 AC109635.6-201ENST00000525487 1113 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 OR6M2P-201ENST00000529831 871 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 AC022878.1-201ENST00000530684 149 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 OR6M3P-201ENST00000531567 700 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC8.77□□□□□ -1.01
COL9A1P20849 AC079031.2-201ENST00000537742 615 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.77□□□□□ -1.01
COL9A1P20849 MPPE1P1-201ENST00000557286 1076 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.77□□□□□ -1.01
COL9A1P20849 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.77□□□□□ -1.01
COL9A1P20849 FRG2HP-201ENST00000568807 832 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 RN7SL753P-201ENST00000581238 290 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC8.77□□□□□ -1.01
COL9A1P20849 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC8.77□□□□□ -1.01
COL9A1P20849 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC8.77□□□□□ -1.01
COL9A1P20849 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC8.77□□□□□ -1.01
COL9A1P20849 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
COL9A1P20849 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC8.77□□□□□ -1.01
COL9A1P20849 LRRC37A11P-201ENST00000425901 3580 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
COL9A1P20849 ATP13A4-201ENST00000295548 2157 ntTSL 5 BASIC8.77□□□□□ -1.01
COL9A1P20849 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC8.77□□□□□ -1.01
COL9A1P20849 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
COL9A1P20849 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
COL9A1P20849 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC8.77□□□□□ -1.01
COL9A1P20849 MAN1A2P1-201ENST00000590286 1400 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 SPIN3-218ENST00000639007 4277 ntAPPRIS P1 TSL 4 BASIC8.77□□□□□ -1.01
COL9A1P20849 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
COL9A1P20849 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
COL9A1P20849 CDY15P-201ENST00000421995 1570 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 CDY22P-201ENST00000451423 1554 ntBASIC8.77□□□□□ -1.01
COL9A1P20849 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
COL9A1P20849 SWT1-201ENST00000367500 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
COL9A1P20849 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
COL9A1P20849 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
COL9A1P20849 ZNF700-203ENST00000622593 2901 ntAPPRIS ALT2 TSL 4 BASIC8.77□□□□□ -1.01
COL9A1P20849 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC8.77□□□□□ -1.01
COL9A1P20849 LY9-201ENST00000263285 2443 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.76□□□□□ -1.01
COL9A1P20849 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 AL353588.1-201ENST00000505802 3513 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
COL9A1P20849 RBFOX1-201ENST00000311745 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC8.76□□□□□ -1.01
COL9A1P20849 AL662907.3-201ENST00000641271 1932 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AL157713.1-201ENST00000379752 1531 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 CENPL-201ENST00000345664 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 AL354740.1-201ENST00000586726 2681 ntTSL 5 BASIC8.76□□□□□ -1.01
COL9A1P20849 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
COL9A1P20849 SNORD42.2-201ENST00000365570 69 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AC093392.1-201ENST00000366280 340 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC8.76□□□□□ -1.01
COL9A1P20849 AC025750.1-201ENST00000399891 379 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AL356057.3-201ENST00000402607 340 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 U3.33-201ENST00000408117 204 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 RNU6-847P-201ENST00000411115 108 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 RN7SKP30-201ENST00000411373 334 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 MTATP6P29-201ENST00000415057 132 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 RPS26P13-201ENST00000419030 330 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.76□□□□□ -1.01
COL9A1P20849 HSPE1P28-201ENST00000443139 211 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AL390728.3-201ENST00000452704 270 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 CECR9-201ENST00000453421 199 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 SNX18P4-201ENST00000456554 838 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AL133480.2-201ENST00000456723 487 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 RN7SL228P-201ENST00000470060 303 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
COL9A1P20849 AC105910.1-201ENST00000482585 483 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AC107398.1-201ENST00000486904 505 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AC007182.2-201ENST00000489251 402 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AC012170.1-201ENST00000495139 359 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.76□□□□□ -1.01
COL9A1P20849 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.76□□□□□ -1.01
COL9A1P20849 SNX5P1-201ENST00000505757 1041 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.76□□□□□ -1.01
COL9A1P20849 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.76□□□□□ -1.01
COL9A1P20849 Y_RNA.711-201ENST00000516993 102 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC8.76□□□□□ -1.01
COL9A1P20849 PSAT1P1-201ENST00000518968 1106 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC8.76□□□□□ -1.01
COL9A1P20849 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC8.76□□□□□ -1.01
COL9A1P20849 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC8.76□□□□□ -1.01
COL9A1P20849 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.76□□□□□ -1.01
COL9A1P20849 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC8.76□□□□□ -1.01
COL9A1P20849 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC8.76□□□□□ -1.01
COL9A1P20849 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC8.76□□□□□ -1.01
COL9A1P20849 AC090948.2-201ENST00000607363 564 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC8.76□□□□□ -1.01
COL9A1P20849 AC093788.1-201ENST00000609356 927 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AC087588.2-201ENST00000617667 426 ntBASIC8.76□□□□□ -1.01
COL9A1P20849 AC005383.1-201ENST00000622689 534 ntBASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms