Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL022578.1-201ENST00000439330 1433 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
RNF144AP50876 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC011379.1-201ENST00000508713 3025 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 NCOA4P2-201ENST00000340589 1813 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
RNF144AP50876 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 F11-AS1-202ENST00000508110 1512 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 CR383658.2-201ENST00000547576 1525 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC103591.2-201ENST00000265259 766 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 RNA5SP250-201ENST00000362534 119 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 RNU1-8P-201ENST00000384328 165 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 FTH1P26-201ENST00000406512 701 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF144AP50876 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF144AP50876 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF144AP50876 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 AL590094.1-203ENST00000435649 828 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 AL450263.2-201ENST00000439400 589 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AC092568.1-201ENST00000440950 1284 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AL353898.1-201ENST00000444055 238 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC079776.3-201ENST00000450665 370 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 RPS27AP2-201ENST00000457576 465 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 KCNAB1-AS1-201ENST00000467794 456 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF144AP50876 RN7SL63P-201ENST00000468228 304 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AC117392.1-201ENST00000487061 596 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC091133.4-201ENST00000511142 308 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AC103770.1-201ENST00000517884 833 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC005832.3-201ENST00000537929 631 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF144AP50876 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC025165.2-201ENST00000549477 699 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF144AP50876 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF144AP50876 AC025198.1-201ENST00000578331 419 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF144AP50876 RN7SL155P-201ENST00000581538 263 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 MIR4637-201ENST00000582405 84 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF144AP50876 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC7.69□□□□□ -1.18
RNF144AP50876 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC7.69□□□□□ -1.18
RNF144AP50876 AL031429.2-201ENST00000602605 649 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AC013553.2-201ENST00000604244 589 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AL358335.3-201ENST00000604678 327 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 TTR-205ENST00000613781 556 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AC009233.1-201ENST00000616477 371 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC7.69□□□□□ -1.18
RNF144AP50876 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 MTND4P27-201ENST00000450813 1354 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 AC092646.2-201ENST00000431242 2095 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 AC089998.1-201ENST00000548575 3141 ntBASIC7.69□□□□□ -1.18
RNF144AP50876 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.69□□□□□ -1.18
RNF144AP50876 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RNF144AP50876 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 AC132825.1-201ENST00000463573 2247 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
RNF144AP50876 AL590763.1-201ENST00000398297 1545 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 MTCO1P23-201ENST00000415223 1526 ntBASIC7.68□□□□□ -1.18
RNF144AP50876 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RNF144AP50876 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms