Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC5.87□□□□□ -1.47
SPTA1P02549 MARK2P4-201ENST00000503381 2380 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 NPL-212ENST00000614468 2376 ntTSL 5 BASIC5.87□□□□□ -1.47
SPTA1P02549 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC5.87□□□□□ -1.47
SPTA1P02549 AL731532.1-201ENST00000623972 4236 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SPTA1P02549 RN7SKP281-201ENST00000410472 352 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 AL663061.1-201ENST00000416625 580 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.87□□□□□ -1.47
SPTA1P02549 BX119321.1-201ENST00000428912 797 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 OR51P1P-201ENST00000447547 942 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 AC133965.1-201ENST00000452984 354 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.87□□□□□ -1.47
SPTA1P02549 RN7SL714P-201ENST00000487050 298 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 RPL10P14-201ENST00000565265 298 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 U1.41-201ENST00000617626 165 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.87□□□□□ -1.47
SPTA1P02549 OLMALINC-203ENST00000641087 3779 ntBASIC5.87□□□□□ -1.47
SPTA1P02549 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SPTA1P02549 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SPTA1P02549 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SPTA1P02549 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SPTA1P02549 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPTA1P02549 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPTA1P02549 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPTA1P02549 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC5.86□□□□□ -1.47
SPTA1P02549 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPTA1P02549 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.86□□□□□ -1.47
SPTA1P02549 AC008753.1-201ENST00000423096 284 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.86□□□□□ -1.47
SPTA1P02549 AC009963.2-201ENST00000453431 138 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 CEACAMP10-202ENST00000495431 496 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.86□□□□□ -1.47
SPTA1P02549 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.86□□□□□ -1.47
SPTA1P02549 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC5.86□□□□□ -1.47
SPTA1P02549 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.86□□□□□ -1.47
SPTA1P02549 LINC02495-203ENST00000636704 242 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 AC127070.3-201ENST00000503695 3263 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPTA1P02549 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPTA1P02549 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC5.86□□□□□ -1.47
SPTA1P02549 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC5.86□□□□□ -1.47
SPTA1P02549 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPTA1P02549 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SPTA1P02549 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPTA1P02549 MTCO1P25-201ENST00000414449 1799 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 OR51A10P-201ENST00000307165 937 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 CYCSP17-201ENST00000407870 315 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.86□□□□□ -1.47
SPTA1P02549 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.86□□□□□ -1.47
SPTA1P02549 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.86□□□□□ -1.47
SPTA1P02549 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 PCBP2P1-201ENST00000437262 977 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 AL583856.1-201ENST00000454078 1101 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SPTA1P02549 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.86□□□□□ -1.47
SPTA1P02549 MTND6P8-201ENST00000503471 522 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 OR5M14P-201ENST00000506803 618 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 AC114781.3-201ENST00000512083 142 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 RNA5SP434-201ENST00000516647 121 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.86□□□□□ -1.47
SPTA1P02549 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC5.86□□□□□ -1.47
SPTA1P02549 RN7SL475P-201ENST00000583379 298 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.86□□□□□ -1.47
SPTA1P02549 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC5.86□□□□□ -1.47
SPTA1P02549 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPTA1P02549 TMEM75-201ENST00000624314 2165 ntBASIC5.86□□□□□ -1.47
SPTA1P02549 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPTA1P02549 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPTA1P02549 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SPTA1P02549 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SPTA1P02549 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.85□□□□□ -1.47
SPTA1P02549 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
SPTA1P02549 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SPTA1P02549 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SPTA1P02549 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC5.85□□□□□ -1.47
SPTA1P02549 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SPTA1P02549 SNORA70-201ENST00000384436 135 ntBASIC5.85□□□□□ -1.47
SPTA1P02549 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SPTA1P02549 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.85□□□□□ -1.47
SPTA1P02549 DHFRP2-201ENST00000414224 547 ntBASIC5.85□□□□□ -1.47
SPTA1P02549 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.85□□□□□ -1.47
SPTA1P02549 AL035660.1-201ENST00000422041 222 ntBASIC5.85□□□□□ -1.47
SPTA1P02549 AC239367.3-201ENST00000428996 814 ntBASIC5.85□□□□□ -1.47
SPTA1P02549 EMC3-AS1-205ENST00000438698 534 ntBASIC5.85□□□□□ -1.47
SPTA1P02549 RN7SL817P-201ENST00000480777 288 ntBASIC5.85□□□□□ -1.47
SPTA1P02549 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.85□□□□□ -1.47
SPTA1P02549 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.85□□□□□ -1.47
SPTA1P02549 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms