Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC4.83□□□□□ -1.64
APOC4P55056 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
APOC4P55056 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.83□□□□□ -1.64
APOC4P55056 AL137141.1-201ENST00000624622 4836 ntBASIC4.83□□□□□ -1.64
APOC4P55056 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOC4P55056 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 AC244033.1-201ENST00000426826 870 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC4.83□□□□□ -1.64
APOC4P55056 AC091390.2-201ENST00000432573 374 ntBASIC4.83□□□□□ -1.64
APOC4P55056 OR6C71P-201ENST00000432580 913 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 YRDCP3-201ENST00000456507 480 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AC005017.1-201ENST00000482002 490 ntBASIC4.83□□□□□ -1.64
APOC4P55056 RN7SL741P-201ENST00000482473 289 ntBASIC4.83□□□□□ -1.64
APOC4P55056 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
APOC4P55056 RN7SL568P-201ENST00000493069 298 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AC122718.2-201ENST00000505325 591 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC4.83□□□□□ -1.64
APOC4P55056 CYCSP25-201ENST00000525280 316 ntBASIC4.83□□□□□ -1.64
APOC4P55056 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC4.83□□□□□ -1.64
APOC4P55056 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.83□□□□□ -1.64
APOC4P55056 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.83□□□□□ -1.64
APOC4P55056 FXNP1-201ENST00000555153 337 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AC121758.1-202ENST00000556917 658 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC4.83□□□□□ -1.64
APOC4P55056 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 RN7SL366P-201ENST00000577957 292 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AC115989.2-201ENST00000578640 563 ntBASIC4.83□□□□□ -1.64
APOC4P55056 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.83□□□□□ -1.64
APOC4P55056 AL589863.1-201ENST00000595383 631 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AL583832.1-201ENST00000603227 784 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AL356986.1-201ENST00000604085 341 ntBASIC4.83□□□□□ -1.64
APOC4P55056 SNORA74.4-201ENST00000607595 199 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AC009779.8-202ENST00000607990 932 ntBASIC4.83□□□□□ -1.64
APOC4P55056 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.83□□□□□ -1.64
APOC4P55056 AC068726.1-201ENST00000610993 341 ntBASIC4.83□□□□□ -1.64
APOC4P55056 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 MIR6085-201ENST00000618314 110 ntBASIC4.83□□□□□ -1.64
APOC4P55056 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOC4P55056 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.83□□□□□ -1.64
APOC4P55056 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 AC096992.2-201ENST00000609553 1684 ntBASIC4.83□□□□□ -1.64
APOC4P55056 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOC4P55056 AL139384.2-201ENST00000613809 3590 ntBASIC4.83□□□□□ -1.64
APOC4P55056 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC4.83□□□□□ -1.64
APOC4P55056 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC4.83□□□□□ -1.64
APOC4P55056 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
APOC4P55056 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC4.82□□□□□ -1.64
APOC4P55056 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC4.82□□□□□ -1.64
APOC4P55056 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOC4P55056 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOC4P55056 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC4.82□□□□□ -1.64
APOC4P55056 AC022507.1-201ENST00000548349 1505 ntBASIC4.82□□□□□ -1.64
APOC4P55056 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC4.82□□□□□ -1.64
APOC4P55056 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC4.82□□□□□ -1.64
APOC4P55056 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOC4P55056 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOC4P55056 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.82□□□□□ -1.64
APOC4P55056 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC4.82□□□□□ -1.64
APOC4P55056 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
APOC4P55056 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC4.82□□□□□ -1.64
APOC4P55056 AC020656.2-201ENST00000613291 5309 ntBASIC4.82□□□□□ -1.64
APOC4P55056 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC4.82□□□□□ -1.64
APOC4P55056 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOC4P55056 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOC4P55056 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC4.82□□□□□ -1.64
APOC4P55056 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
APOC4P55056 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOC4P55056 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOC4P55056 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOC4P55056 KCNMB3P1-202ENST00000493696 3389 ntBASIC4.82□□□□□ -1.64
APOC4P55056 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
APOC4P55056 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOC4P55056 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
APOC4P55056 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.82□□□□□ -1.64
APOC4P55056 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC4.82□□□□□ -1.64
APOC4P55056 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOC4P55056 YWHAZP4-201ENST00000392459 708 ntBASIC4.82□□□□□ -1.64
APOC4P55056 THEM7P-201ENST00000419556 672 ntBASIC4.82□□□□□ -1.64
APOC4P55056 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.82□□□□□ -1.64
APOC4P55056 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC4.82□□□□□ -1.64
APOC4P55056 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC4.82□□□□□ -1.64
APOC4P55056 RN7SL834P-201ENST00000461450 286 ntBASIC4.82□□□□□ -1.64
APOC4P55056 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC4.82□□□□□ -1.64
APOC4P55056 CREM-242ENST00000490511 469 ntTSL 2 BASIC4.82□□□□□ -1.64
APOC4P55056 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms