Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
COL4A5P29400 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
COL4A5P29400 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A5P29400 RNA5SP46-201ENST00000362370 120 ntBASIC7.39□□□□□ -1.23
COL4A5P29400 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A5P29400 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.39□□□□□ -1.23
COL4A5P29400 SPTLC1P2-201ENST00000407089 121 ntBASIC7.39□□□□□ -1.23
COL4A5P29400 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.39□□□□□ -1.23
COL4A5P29400 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.39□□□□□ -1.23
COL4A5P29400 RPL34P3-201ENST00000421454 338 ntBASIC7.39□□□□□ -1.23
COL4A5P29400 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.39□□□□□ -1.23
COL4A5P29400 EEF1B2P6-201ENST00000445713 673 ntBASIC7.39□□□□□ -1.23
COL4A5P29400 NENFP3-201ENST00000503735 313 ntBASIC7.39□□□□□ -1.23
COL4A5P29400 AC084337.1-201ENST00000524809 686 ntBASIC7.39□□□□□ -1.23
COL4A5P29400 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.39□□□□□ -1.23
COL4A5P29400 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.39□□□□□ -1.23
COL4A5P29400 AC096861.1-201ENST00000616652 240 ntBASIC7.39□□□□□ -1.23
COL4A5P29400 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A5P29400 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A5P29400 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.39□□□□□ -1.23
COL4A5P29400 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A5P29400 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
COL4A5P29400 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A5P29400 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
COL4A5P29400 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.39□□□□□ -1.23
COL4A5P29400 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.39□□□□□ -1.23
COL4A5P29400 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A5P29400 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
COL4A5P29400 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
COL4A5P29400 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A5P29400 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A5P29400 ARHGAP42P2-201ENST00000416089 2140 ntBASIC7.39□□□□□ -1.23
COL4A5P29400 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 MIR541-201ENST00000401360 84 ntBASIC7.38□□□□□ -1.23
COL4A5P29400 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.38□□□□□ -1.23
COL4A5P29400 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.38□□□□□ -1.23
COL4A5P29400 AC016027.4-201ENST00000450866 277 ntBASIC7.38□□□□□ -1.23
COL4A5P29400 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.38□□□□□ -1.23
COL4A5P29400 WBP1LP3-201ENST00000523033 208 ntBASIC7.38□□□□□ -1.23
COL4A5P29400 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC7.38□□□□□ -1.23
COL4A5P29400 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.38□□□□□ -1.23
COL4A5P29400 MIR3189-201ENST00000578735 73 ntBASIC7.38□□□□□ -1.23
COL4A5P29400 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.38□□□□□ -1.23
COL4A5P29400 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.38□□□□□ -1.23
COL4A5P29400 AC118658.2-201ENST00000618697 459 ntBASIC7.38□□□□□ -1.23
COL4A5P29400 AF117829.2-201ENST00000619538 361 ntBASIC7.38□□□□□ -1.23
COL4A5P29400 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.38□□□□□ -1.23
COL4A5P29400 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.38□□□□□ -1.23
COL4A5P29400 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.38□□□□□ -1.23
COL4A5P29400 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.38□□□□□ -1.23
COL4A5P29400 C4BPAP1-201ENST00000415474 1893 ntBASIC7.38□□□□□ -1.23
COL4A5P29400 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL4A5P29400 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.38□□□□□ -1.23
COL4A5P29400 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC7.38□□□□□ -1.23
COL4A5P29400 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL4A5P29400 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC7.38□□□□□ -1.23
COL4A5P29400 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.38□□□□□ -1.23
COL4A5P29400 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL4A5P29400 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A5P29400 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.38□□□□□ -1.23
COL4A5P29400 PFN1P6-201ENST00000476786 399 ntBASIC7.38□□□□□ -1.23
COL4A5P29400 SIAH1P1-201ENST00000479411 923 ntBASIC7.38□□□□□ -1.23
COL4A5P29400 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.38□□□□□ -1.23
COL4A5P29400 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
COL4A5P29400 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.38□□□□□ -1.23
COL4A5P29400 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.38□□□□□ -1.23
COL4A5P29400 MIR1269B-201ENST00000580405 75 ntBASIC7.38□□□□□ -1.23
COL4A5P29400 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.38□□□□□ -1.23
COL4A5P29400 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.38□□□□□ -1.23
COL4A5P29400 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
COL4A5P29400 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.38□□□□□ -1.23
COL4A5P29400 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
COL4A5P29400 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
COL4A5P29400 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A5P29400 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms