Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 RPL11P4-201ENST00000332269 436 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 RN7SKP10-201ENST00000364291 325 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 RNU6-877P-201ENST00000383868 107 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 RNA5SP221-201ENST00000411271 103 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 MTCO1P20-201ENST00000425366 358 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 EIF3IP1-201ENST00000433048 967 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 RPS28P8-201ENST00000435020 208 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 SNRPFP4-201ENST00000456366 242 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 SNX18P4-201ENST00000456554 838 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 ARPC3P2-201ENST00000457786 533 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 PPIAP28-201ENST00000458378 485 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 HNRNPA1P20-201ENST00000484852 955 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 RNU6-430P-201ENST00000517078 107 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC022690.1-201ENST00000526681 550 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 MTND1P35-201ENST00000526739 508 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC007751.2-201ENST00000534173 291 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC089998.3-201ENST00000549715 493 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC008127.2-201ENST00000549925 1075 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AL157687.1-201ENST00000554853 619 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC073091.2-201ENST00000603205 907 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AL161729.4-201ENST00000604650 476 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AL160413.1-201ENST00000622780 310 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC138305.3-201ENST00000624988 240 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 SAMMSON-227ENST00000642114 1199 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 AC055716.2-201ENST00000552545 2441 ntBASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CCNYL3P0C7X3 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CCNYL3P0C7X3 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CCNYL3P0C7X3 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CCNYL3P0C7X3 AL034370.1-201ENST00000397254 1590 ntBASIC8.18□□□□□ -1.1
CCNYL3P0C7X3 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCNYL3P0C7X3 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCNYL3P0C7X3 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCNYL3P0C7X3 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.18□□□□□ -1.1
CCNYL3P0C7X3 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCNYL3P0C7X3 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.18□□□□□ -1.1
CCNYL3P0C7X3 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CCNYL3P0C7X3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms