Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-DQA2P01906 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-DQA2P01906 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.93□□□□□ -1.46
HLA-DQA2P01906 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DQA2P01906 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.93□□□□□ -1.46
HLA-DQA2P01906 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
HLA-DQA2P01906 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.93□□□□□ -1.46
HLA-DQA2P01906 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HLA-DQA2P01906 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AL391261.1-201ENST00000555712 1479 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AL731532.1-201ENST00000623972 4236 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC020658.2-201ENST00000559030 4020 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 RNU6-697P-201ENST00000363348 107 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 RNU1-56P-201ENST00000391303 164 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 SNORA11D-201ENST00000408548 128 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 SNORA11E-201ENST00000408778 128 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 NPM1P26-201ENST00000426339 738 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 OR52S1P-201ENST00000427016 937 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC023141.6-201ENST00000429418 337 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC114402.2-201ENST00000432760 643 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 CBX5P1-201ENST00000468470 561 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC068522.1-201ENST00000482895 345 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC021146.11-201ENST00000503319 491 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 PCNAP1-201ENST00000505363 709 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC091849.1-201ENST00000509920 121 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 RNA5SP318-201ENST00000516352 92 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC091304.4-201ENST00000565703 620 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 MIR5682-201ENST00000584864 76 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AL049829.3-202ENST00000604278 711 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC245407.2-201ENST00000614199 451 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC243725.1-201ENST00000637164 436 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC011592.1-201ENST00000624647 3634 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 AC022613.3-201ENST00000560740 1346 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.92□□□□□ -1.46
HLA-DQA2P01906 TRIM53CP-201ENST00000531490 1354 ntBASIC5.92□□□□□ -1.46
HLA-DQA2P01906 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HLA-DQA2P01906 RBBP4P5-201ENST00000398583 1266 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms