Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.38□□□□□ -1.23
CCNA1P78396 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.38□□□□□ -1.23
CCNA1P78396 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.38□□□□□ -1.23
CCNA1P78396 AP005136.2-201ENST00000583253 1049 ntBASIC7.38□□□□□ -1.23
CCNA1P78396 AP001264.1-201ENST00000620602 703 ntBASIC7.38□□□□□ -1.23
CCNA1P78396 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.38□□□□□ -1.23
CCNA1P78396 OR7E91P-202ENST00000642062 1198 ntBASIC7.38□□□□□ -1.23
CCNA1P78396 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
CCNA1P78396 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.38□□□□□ -1.23
CCNA1P78396 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CCNA1P78396 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.38□□□□□ -1.23
CCNA1P78396 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCNA1P78396 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCNA1P78396 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.37□□□□□ -1.23
CCNA1P78396 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.37□□□□□ -1.23
CCNA1P78396 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.37□□□□□ -1.23
CCNA1P78396 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.37□□□□□ -1.23
CCNA1P78396 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 SNORA51.9-201ENST00000384295 124 ntBASIC7.37□□□□□ -1.23
CCNA1P78396 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CCNA1P78396 MIR541-201ENST00000401360 84 ntBASIC7.37□□□□□ -1.23
CCNA1P78396 RN7SKP144-201ENST00000411108 279 ntBASIC7.37□□□□□ -1.23
CCNA1P78396 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.37□□□□□ -1.23
CCNA1P78396 SETP20-201ENST00000457046 852 ntBASIC7.37□□□□□ -1.23
CCNA1P78396 RN7SL369P-201ENST00000477138 299 ntBASIC7.37□□□□□ -1.23
CCNA1P78396 LDHAP1-201ENST00000509421 992 ntBASIC7.37□□□□□ -1.23
CCNA1P78396 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.37□□□□□ -1.23
CCNA1P78396 NATP-201ENST00000523491 878 ntBASIC7.37□□□□□ -1.23
CCNA1P78396 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.37□□□□□ -1.23
CCNA1P78396 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CCNA1P78396 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.37□□□□□ -1.23
CCNA1P78396 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.37□□□□□ -1.23
CCNA1P78396 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.37□□□□□ -1.23
CCNA1P78396 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CCNA1P78396 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.37□□□□□ -1.23
CCNA1P78396 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.36□□□□□ -1.23
CCNA1P78396 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.36□□□□□ -1.23
CCNA1P78396 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 EIF3EP1-201ENST00000433978 1316 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
CCNA1P78396 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CCNA1P78396 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CCNA1P78396 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.36□□□□□ -1.23
CCNA1P78396 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.36□□□□□ -1.23
CCNA1P78396 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.36□□□□□ -1.23
CCNA1P78396 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.36□□□□□ -1.23
CCNA1P78396 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.36□□□□□ -1.23
CCNA1P78396 VDAC1P2-201ENST00000423609 850 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.36□□□□□ -1.23
CCNA1P78396 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.36□□□□□ -1.23
CCNA1P78396 AL590004.3-202ENST00000445883 451 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.36□□□□□ -1.23
CCNA1P78396 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CCNA1P78396 AC098847.1-201ENST00000473094 348 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.36□□□□□ -1.23
CCNA1P78396 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CCNA1P78396 AC025458.1-201ENST00000506046 166 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.36□□□□□ -1.23
CCNA1P78396 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.36□□□□□ -1.23
CCNA1P78396 AC079905.1-201ENST00000549280 475 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.36□□□□□ -1.23
CCNA1P78396 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.36□□□□□ -1.23
CCNA1P78396 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
CCNA1P78396 AC007346.1-201ENST00000569208 867 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 AC008521.2-201ENST00000591021 259 ntBASIC7.36□□□□□ -1.23
CCNA1P78396 OR7A8P-201ENST00000595427 913 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms