Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL445649.1-201ENST00000615941 691 ntBASIC6.64□□□□□ -1.35
CDH6P55285 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
CDH6P55285 AC211486.4-201ENST00000621495 113 ntBASIC6.64□□□□□ -1.35
CDH6P55285 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.64□□□□□ -1.35
CDH6P55285 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.64□□□□□ -1.35
CDH6P55285 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDH6P55285 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
CDH6P55285 BIN2P1-201ENST00000504996 1530 ntBASIC6.64□□□□□ -1.35
CDH6P55285 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CDH6P55285 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDH6P55285 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDH6P55285 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDH6P55285 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CDH6P55285 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDH6P55285 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.64□□□□□ -1.35
CDH6P55285 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.64□□□□□ -1.35
CDH6P55285 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CDH6P55285 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.63□□□□□ -1.35
CDH6P55285 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
CDH6P55285 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
CDH6P55285 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CDH6P55285 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 SNORD16-201ENST00000362803 99 ntBASIC6.63□□□□□ -1.35
CDH6P55285 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.63□□□□□ -1.35
CDH6P55285 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 UBTFL2-201ENST00000411859 1191 ntBASIC6.63□□□□□ -1.35
CDH6P55285 UBE2V1P14-201ENST00000415815 558 ntBASIC6.63□□□□□ -1.35
CDH6P55285 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.63□□□□□ -1.35
CDH6P55285 AC079248.1-201ENST00000427568 1546 ntBASIC6.63□□□□□ -1.35
CDH6P55285 AC092967.1-201ENST00000449016 481 ntBASIC6.63□□□□□ -1.35
CDH6P55285 RN7SL165P-201ENST00000477476 291 ntBASIC6.63□□□□□ -1.35
CDH6P55285 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
CDH6P55285 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.63□□□□□ -1.35
CDH6P55285 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CDH6P55285 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.63□□□□□ -1.35
CDH6P55285 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.63□□□□□ -1.35
CDH6P55285 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.63□□□□□ -1.35
CDH6P55285 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
CDH6P55285 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 TPRX1P1-201ENST00000557620 319 ntBASIC6.63□□□□□ -1.35
CDH6P55285 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.63□□□□□ -1.35
CDH6P55285 AC079414.3-201ENST00000612986 1090 ntBASIC6.63□□□□□ -1.35
CDH6P55285 AC005899.6-201ENST00000620729 297 ntBASIC6.63□□□□□ -1.35
CDH6P55285 AC079753.1-201ENST00000623243 3868 ntBASIC6.63□□□□□ -1.35
CDH6P55285 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
CDH6P55285 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.63□□□□□ -1.35
CDH6P55285 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CDH6P55285 AL359976.1-201ENST00000418655 3528 ntBASIC6.63□□□□□ -1.35
CDH6P55285 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH6P55285 LINC01616-201ENST00000561816 2280 ntBASIC6.62□□□□□ -1.35
CDH6P55285 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH6P55285 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.62□□□□□ -1.35
CDH6P55285 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDH6P55285 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CDH6P55285 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH6P55285 AC125238.2-201ENST00000430003 1440 ntBASIC6.62□□□□□ -1.35
CDH6P55285 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH6P55285 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CDH6P55285 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CDH6P55285 SNORD8-201ENST00000363915 110 ntBASIC6.62□□□□□ -1.35
CDH6P55285 VIM2P-201ENST00000402383 1294 ntBASIC6.62□□□□□ -1.35
CDH6P55285 CYP4F30P-202ENST00000420048 405 ntBASIC6.62□□□□□ -1.35
CDH6P55285 RPEP4-201ENST00000437636 602 ntBASIC6.62□□□□□ -1.35
CDH6P55285 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.62□□□□□ -1.35
CDH6P55285 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH6P55285 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.62□□□□□ -1.35
CDH6P55285 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.62□□□□□ -1.35
CDH6P55285 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.62□□□□□ -1.35
CDH6P55285 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.62□□□□□ -1.35
CDH6P55285 AC244034.2-201ENST00000562504 509 ntBASIC6.62□□□□□ -1.35
CDH6P55285 AC009120.3-201ENST00000563335 499 ntBASIC6.62□□□□□ -1.35
CDH6P55285 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.62□□□□□ -1.35
CDH6P55285 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH6P55285 AC024589.2-201ENST00000605642 1294 ntBASIC6.62□□□□□ -1.35
CDH6P55285 AL589743.6-201ENST00000611025 117 ntBASIC6.62□□□□□ -1.35
CDH6P55285 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CDH6P55285 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CDH6P55285 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.62□□□□□ -1.35
CDH6P55285 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDH6P55285 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH6P55285 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.62□□□□□ -1.35
CDH6P55285 MAPK10-287ENST00000641217 3037 ntBASIC6.62□□□□□ -1.35
CDH6P55285 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDH6P55285 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDH6P55285 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH6P55285 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH6P55285 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDH6P55285 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH6P55285 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.62□□□□□ -1.35
CDH6P55285 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH6P55285 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms