Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.98□□□□□ -1.29
NEK3P51956 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.98□□□□□ -1.29
NEK3P51956 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.98□□□□□ -1.29
NEK3P51956 AC119674.1-204ENST00000641348 1343 ntBASIC6.98□□□□□ -1.29
NEK3P51956 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
NEK3P51956 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.97□□□□□ -1.29
NEK3P51956 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.97□□□□□ -1.29
NEK3P51956 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
NEK3P51956 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
NEK3P51956 AL356317.1-201ENST00000396110 1436 ntBASIC6.97□□□□□ -1.29
NEK3P51956 RNU2-72P-201ENST00000411175 163 ntBASIC6.97□□□□□ -1.29
NEK3P51956 AC095038.1-201ENST00000429248 1591 ntBASIC6.97□□□□□ -1.29
NEK3P51956 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.97□□□□□ -1.29
NEK3P51956 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.97□□□□□ -1.29
NEK3P51956 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.97□□□□□ -1.29
NEK3P51956 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.97□□□□□ -1.29
NEK3P51956 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.97□□□□□ -1.29
NEK3P51956 HMGN1P32-201ENST00000441744 256 ntBASIC6.97□□□□□ -1.29
NEK3P51956 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 CCRL1P1-201ENST00000449542 1053 ntBASIC6.97□□□□□ -1.29
NEK3P51956 GOT2P2-201ENST00000450663 1251 ntBASIC6.97□□□□□ -1.29
NEK3P51956 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.97□□□□□ -1.29
NEK3P51956 AC104629.2-201ENST00000468627 598 ntBASIC6.97□□□□□ -1.29
NEK3P51956 RN7SL390P-201ENST00000470634 284 ntBASIC6.97□□□□□ -1.29
NEK3P51956 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.97□□□□□ -1.29
NEK3P51956 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.97□□□□□ -1.29
NEK3P51956 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.97□□□□□ -1.29
NEK3P51956 SETP12-201ENST00000514068 805 ntBASIC6.97□□□□□ -1.29
NEK3P51956 IGKV2D-38-201ENST00000518423 240 ntBASIC6.97□□□□□ -1.29
NEK3P51956 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
NEK3P51956 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.97□□□□□ -1.29
NEK3P51956 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 PPIAP6-201ENST00000557078 499 ntBASIC6.97□□□□□ -1.29
NEK3P51956 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.97□□□□□ -1.29
NEK3P51956 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.97□□□□□ -1.29
NEK3P51956 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.97□□□□□ -1.29
NEK3P51956 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.97□□□□□ -1.29
NEK3P51956 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.97□□□□□ -1.29
NEK3P51956 AC106730.3-201ENST00000624568 641 ntBASIC6.97□□□□□ -1.29
NEK3P51956 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.97□□□□□ -1.29
NEK3P51956 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.97□□□□□ -1.29
NEK3P51956 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
NEK3P51956 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
NEK3P51956 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
NEK3P51956 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.97□□□□□ -1.29
NEK3P51956 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
NEK3P51956 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.96□□□□□ -1.29
NEK3P51956 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.96□□□□□ -1.29
NEK3P51956 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
NEK3P51956 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NEK3P51956 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.96□□□□□ -1.29
NEK3P51956 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
NEK3P51956 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
NEK3P51956 MAPK10-379ENST00000642013 1385 ntBASIC6.96□□□□□ -1.29
NEK3P51956 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.29
NEK3P51956 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.96□□□□□ -1.29
NEK3P51956 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
NEK3P51956 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
NEK3P51956 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.29
NEK3P51956 AC004023.1-201ENST00000561473 1744 ntBASIC6.96□□□□□ -1.29
NEK3P51956 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.96□□□□□ -1.29
NEK3P51956 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
NEK3P51956 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.96□□□□□ -1.3
NEK3P51956 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.96□□□□□ -1.3
NEK3P51956 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
NEK3P51956 ARSFP1-201ENST00000398758 477 ntBASIC6.96□□□□□ -1.3
NEK3P51956 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.96□□□□□ -1.3
NEK3P51956 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
NEK3P51956 PTPN2P1-201ENST00000423212 1072 ntBASIC6.96□□□□□ -1.3
NEK3P51956 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.96□□□□□ -1.3
NEK3P51956 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.96□□□□□ -1.3
NEK3P51956 SNRPFP2-201ENST00000440710 251 ntBASIC6.96□□□□□ -1.3
NEK3P51956 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.96□□□□□ -1.3
NEK3P51956 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.96□□□□□ -1.3
NEK3P51956 RPL31P11-202ENST00000454082 372 ntBASIC6.96□□□□□ -1.3
NEK3P51956 CEACAMP11-201ENST00000455211 583 ntBASIC6.96□□□□□ -1.3
NEK3P51956 RN7SL379P-201ENST00000479912 293 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms