Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AP000620.1-201ENST00000527147 504 ntBASIC9.33□□□□□ -0.92
HFM1A2PYH4 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC9.33□□□□□ -0.92
HFM1A2PYH4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC9.33□□□□□ -0.92
HFM1A2PYH4 AP001437.1-201ENST00000608783 456 ntBASIC9.33□□□□□ -0.92
HFM1A2PYH4 AL136097.3-201ENST00000611097 505 ntBASIC9.33□□□□□ -0.92
HFM1A2PYH4 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC9.33□□□□□ -0.92
HFM1A2PYH4 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
HFM1A2PYH4 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HFM1A2PYH4 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
HFM1A2PYH4 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
HFM1A2PYH4 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC9.33□□□□□ -0.92
HFM1A2PYH4 AP003486.1-201ENST00000525716 3994 ntBASIC9.33□□□□□ -0.92
HFM1A2PYH4 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
HFM1A2PYH4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
HFM1A2PYH4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
HFM1A2PYH4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
HFM1A2PYH4 AC027575.3-201ENST00000583058 2747 ntBASIC9.33□□□□□ -0.92
HFM1A2PYH4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
HFM1A2PYH4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
HFM1A2PYH4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC9.33□□□□□ -0.92
HFM1A2PYH4 AC024651.2-201ENST00000562480 2098 ntBASIC9.32□□□□□ -0.92
HFM1A2PYH4 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
HFM1A2PYH4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
HFM1A2PYH4 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HFM1A2PYH4 RNA5SP350-201ENST00000363298 111 ntBASIC9.32□□□□□ -0.92
HFM1A2PYH4 RN7SKP161-201ENST00000411110 305 ntBASIC9.32□□□□□ -0.92
HFM1A2PYH4 AC130360.1-201ENST00000425489 1117 ntBASIC9.32□□□□□ -0.92
HFM1A2PYH4 AC023141.3-201ENST00000436698 278 ntBASIC9.32□□□□□ -0.92
HFM1A2PYH4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 AC009879.1-201ENST00000520029 839 ntBASIC9.32□□□□□ -0.92
HFM1A2PYH4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 AC130365.2-201ENST00000525882 1201 ntBASIC9.32□□□□□ -0.92
HFM1A2PYH4 AP005639.1-201ENST00000526939 192 ntBASIC9.32□□□□□ -0.92
HFM1A2PYH4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
HFM1A2PYH4 CYCSP38-201ENST00000559840 322 ntBASIC9.32□□□□□ -0.92
HFM1A2PYH4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
HFM1A2PYH4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 AC011416.1-201ENST00000514947 1732 ntBASIC9.32□□□□□ -0.92
HFM1A2PYH4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC9.32□□□□□ -0.92
HFM1A2PYH4 EIF3EP1-201ENST00000433978 1316 ntBASIC9.32□□□□□ -0.92
HFM1A2PYH4 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 FAM32BP-201ENST00000344033 333 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 PPIAP10-201ENST00000438675 458 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 GAPDHP23-201ENST00000444823 993 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 AC090958.1-201ENST00000511122 351 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 AC108103.1-201ENST00000511286 446 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 CR383658.1-201ENST00000514609 734 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 LINC00556-201ENST00000569603 412 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 FAM27E2-201ENST00000619668 403 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 AC127024.8-201ENST00000623719 2094 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 LRRC37A9P-201ENST00000603850 5376 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 AC009135.2-201ENST00000624136 1768 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 AC011815.2-201ENST00000618230 2021 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 AL157831.2-201ENST00000564681 3095 ntBASIC9.31□□□□□ -0.92
HFM1A2PYH4 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 CAST-222ENST00000508579 1758 ntTSL 2 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC9.31□□□□□ -0.92
HFM1A2PYH4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HFM1A2PYH4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms