Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
PDS5AQ29RF7 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AP000866.6-201ENST00000638898 3579 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 RNA5SP433-201ENST00000364491 114 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 RN7SKP240-201ENST00000410583 375 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 RPS7P14-201ENST00000426405 583 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AC011742.2-201ENST00000443818 352 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AC010240.2-201ENST00000445363 1205 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AC144530.1-201ENST00000452862 555 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AL133351.3-201ENST00000454998 193 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 RPL12P30-201ENST00000488389 499 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 MTND6P8-201ENST00000503471 522 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AC097467.4-201ENST00000605504 141 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AL008723.3-201ENST00000608926 449 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 AC010998.3-201ENST00000613871 631 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 MIR7159-201ENST00000620587 66 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PDS5AQ29RF7 QRSL1P1-201ENST00000400977 1540 ntBASIC7.68□□□□□ -1.18
PDS5AQ29RF7 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 RN7SKP15-201ENST00000364742 309 ntBASIC7.67□□□□□ -1.18
PDS5AQ29RF7 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.67□□□□□ -1.18
PDS5AQ29RF7 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AC009879.1-201ENST00000520029 839 ntBASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.67□□□□□ -1.18
PDS5AQ29RF7 MIR6778-201ENST00000617912 73 ntBASIC7.67□□□□□ -1.18
PDS5AQ29RF7 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
PDS5AQ29RF7 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms