Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.4□□□□□ -1.23
NID1P14543 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NID1P14543 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC7.4□□□□□ -1.23
NID1P14543 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.4□□□□□ -1.23
NID1P14543 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NID1P14543 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.23
NID1P14543 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
NID1P14543 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.39□□□□□ -1.23
NID1P14543 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 AL365475.1-201ENST00000565135 1949 ntBASIC7.39□□□□□ -1.23
NID1P14543 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.39□□□□□ -1.23
NID1P14543 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NID1P14543 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.39□□□□□ -1.23
NID1P14543 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NID1P14543 AL121657.1-201ENST00000327215 531 ntBASIC7.39□□□□□ -1.23
NID1P14543 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 TAC1-203ENST00000350485 975 ntTSL 5 BASIC7.39□□□□□ -1.23
NID1P14543 Y_RNA.162-201ENST00000363683 102 ntBASIC7.39□□□□□ -1.23
NID1P14543 Y_RNA.192-201ENST00000363977 102 ntBASIC7.39□□□□□ -1.23
NID1P14543 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.39□□□□□ -1.23
NID1P14543 LST1-211ENST00000376110 433 ntTSL 3 BASIC7.39□□□□□ -1.23
NID1P14543 MIR181A1-201ENST00000385026 110 ntBASIC7.39□□□□□ -1.23
NID1P14543 SNORA40.2-201ENST00000390847 128 ntBASIC7.39□□□□□ -1.23
NID1P14543 RNU6-1009P-201ENST00000390996 107 ntBASIC7.39□□□□□ -1.23
NID1P14543 RNA5SP265-201ENST00000411023 111 ntBASIC7.39□□□□□ -1.23
NID1P14543 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC7.39□□□□□ -1.23
NID1P14543 OR10U1P-201ENST00000414690 905 ntBASIC7.39□□□□□ -1.23
NID1P14543 AL139413.1-201ENST00000421309 217 ntBASIC7.39□□□□□ -1.23
NID1P14543 AC004448.2-201ENST00000422360 586 ntBASIC7.39□□□□□ -1.23
NID1P14543 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC7.39□□□□□ -1.23
NID1P14543 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC7.39□□□□□ -1.23
NID1P14543 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.39□□□□□ -1.23
NID1P14543 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC7.39□□□□□ -1.23
NID1P14543 AC098828.1-201ENST00000436164 440 ntBASIC7.39□□□□□ -1.23
NID1P14543 ACTP1-201ENST00000440793 383 ntBASIC7.39□□□□□ -1.23
NID1P14543 GAGE12J-201ENST00000442437 541 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.39□□□□□ -1.23
NID1P14543 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC7.39□□□□□ -1.23
NID1P14543 NFU1P2-201ENST00000448700 469 ntBASIC7.39□□□□□ -1.23
NID1P14543 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
NID1P14543 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC7.39□□□□□ -1.23
NID1P14543 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC7.39□□□□□ -1.23
NID1P14543 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC7.39□□□□□ -1.23
NID1P14543 GAPDHP36-201ENST00000480688 918 ntBASIC7.39□□□□□ -1.23
NID1P14543 AC096743.1-201ENST00000485172 319 ntBASIC7.39□□□□□ -1.23
NID1P14543 NIPA2P2-201ENST00000496376 1083 ntBASIC7.39□□□□□ -1.23
NID1P14543 RNU6-875P-201ENST00000516488 106 ntBASIC7.39□□□□□ -1.23
NID1P14543 RNU6-1153P-201ENST00000516760 105 ntBASIC7.39□□□□□ -1.23
NID1P14543 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.39□□□□□ -1.23
NID1P14543 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC7.39□□□□□ -1.23
NID1P14543 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.39□□□□□ -1.23
NID1P14543 AP000435.1-201ENST00000528539 496 ntBASIC7.39□□□□□ -1.23
NID1P14543 AP003033.2-201ENST00000528901 805 ntBASIC7.39□□□□□ -1.23
NID1P14543 AP000619.3-201ENST00000535634 1127 ntBASIC7.39□□□□□ -1.23
NID1P14543 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC7.39□□□□□ -1.23
NID1P14543 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.39□□□□□ -1.23
NID1P14543 AL109628.2-201ENST00000554037 201 ntBASIC7.39□□□□□ -1.23
NID1P14543 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.39□□□□□ -1.23
NID1P14543 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC7.39□□□□□ -1.23
NID1P14543 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.39□□□□□ -1.23
NID1P14543 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC7.39□□□□□ -1.23
NID1P14543 MT1L-202ENST00000566367 78 ntBASIC7.39□□□□□ -1.23
NID1P14543 AC002519.2-203ENST00000567043 837 ntBASIC7.39□□□□□ -1.23
NID1P14543 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC7.39□□□□□ -1.23
NID1P14543 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC7.39□□□□□ -1.23
NID1P14543 AC008507.1-201ENST00000587506 734 ntBASIC7.39□□□□□ -1.23
NID1P14543 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.39□□□□□ -1.23
NID1P14543 AC091304.9-201ENST00000612091 226 ntBASIC7.39□□□□□ -1.23
NID1P14543 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC7.39□□□□□ -1.23
NID1P14543 FRG1KP-201ENST00000623592 341 ntBASIC7.39□□□□□ -1.23
NID1P14543 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.39□□□□□ -1.23
NID1P14543 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NID1P14543 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
NID1P14543 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
NID1P14543 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC7.39□□□□□ -1.23
NID1P14543 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC7.38□□□□□ -1.23
NID1P14543 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NID1P14543 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC7.38□□□□□ -1.23
NID1P14543 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NID1P14543 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms