Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.69□□□□□ -1.5
UBCP0CG48 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.69□□□□□ -1.5
UBCP0CG48 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.69□□□□□ -1.5
UBCP0CG48 AC093815.1-201ENST00000508637 280 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.69□□□□□ -1.5
UBCP0CG48 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.69□□□□□ -1.5
UBCP0CG48 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.69□□□□□ -1.5
UBCP0CG48 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.69□□□□□ -1.5
UBCP0CG48 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.69□□□□□ -1.5
UBCP0CG48 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
UBCP0CG48 SETP17-201ENST00000534163 817 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.69□□□□□ -1.5
UBCP0CG48 NF1P12-201ENST00000549593 583 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.69□□□□□ -1.5
UBCP0CG48 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.69□□□□□ -1.5
UBCP0CG48 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.69□□□□□ -1.5
UBCP0CG48 AL360012.1-201ENST00000602813 131 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 AC091133.5-201ENST00000603088 301 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 U1.25-201ENST00000614085 162 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 U1.34-201ENST00000618578 162 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 U1.31-201ENST00000620022 160 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
UBCP0CG48 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UBCP0CG48 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UBCP0CG48 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
UBCP0CG48 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UBCP0CG48 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
UBCP0CG48 AL157831.2-201ENST00000564681 3095 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.68□□□□□ -1.5
UBCP0CG48 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
UBCP0CG48 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
UBCP0CG48 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 AC023245.2-201ENST00000530760 2978 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 AC110373.1-201ENST00000505994 3505 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
UBCP0CG48 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
UBCP0CG48 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
UBCP0CG48 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.68□□□□□ -1.5
UBCP0CG48 LCN1P2-201ENST00000372030 223 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 RNA5SP115-201ENST00000411160 107 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.68□□□□□ -1.5
UBCP0CG48 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.68□□□□□ -1.5
UBCP0CG48 RPS17P17-201ENST00000419392 409 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.68□□□□□ -1.5
UBCP0CG48 RPL23AP85-201ENST00000421838 433 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 GRPEL2P2-201ENST00000421856 670 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 SPATA20P1-201ENST00000423089 438 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.68□□□□□ -1.5
UBCP0CG48 RN7SL868P-201ENST00000485915 303 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.68□□□□□ -1.5
UBCP0CG48 AC131392.1-201ENST00000506490 633 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
UBCP0CG48 RPL7L1P7-201ENST00000509986 724 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.68□□□□□ -1.5
UBCP0CG48 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.68□□□□□ -1.5
UBCP0CG48 AC007068.2-201ENST00000543168 395 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.68□□□□□ -1.5
UBCP0CG48 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.68□□□□□ -1.5
UBCP0CG48 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.68□□□□□ -1.5
UBCP0CG48 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.68□□□□□ -1.5
UBCP0CG48 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 AC004839.1-201ENST00000610269 501 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.68□□□□□ -1.5
UBCP0CG48 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.68□□□□□ -1.5
UBCP0CG48 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.68□□□□□ -1.5
UBCP0CG48 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.68□□□□□ -1.5
UBCP0CG48 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 TUBBP10-201ENST00000427668 1301 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.68□□□□□ -1.5
UBCP0CG48 LINC01616-201ENST00000561816 2280 ntBASIC5.68□□□□□ -1.5
UBCP0CG48 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBCP0CG48 AC093844.1-201ENST00000514910 1361 ntBASIC5.67□□□□□ -1.5
UBCP0CG48 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.67□□□□□ -1.5
UBCP0CG48 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBCP0CG48 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.67□□□□□ -1.5
UBCP0CG48 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBCP0CG48 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBCP0CG48 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBCP0CG48 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.67□□□□□ -1.5
UBCP0CG48 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.67□□□□□ -1.5
UBCP0CG48 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
UBCP0CG48 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBCP0CG48 AC004656.1-201ENST00000568479 4951 ntBASIC5.67□□□□□ -1.5
UBCP0CG48 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.67□□□□□ -1.5
UBCP0CG48 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.67□□□□□ -1.5
UBCP0CG48 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBCP0CG48 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms