Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 USP54-201ENST00000339859 6247 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC011455.2-201ENST00000599320 3336 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 RN7SKP128-201ENST00000364270 303 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 CYB5AP4-201ENST00000396692 399 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 RPS26P13-201ENST00000419030 330 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AL122020.1-201ENST00000472287 459 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AP000662.1-201ENST00000530952 487 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 OR5D15P-201ENST00000531671 942 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AP001784.1-201ENST00000624107 428 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 NWD1-204ENST00000524140 7641 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC241584.2-201ENST00000637142 2090 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC083806.2-201ENST00000617795 2685 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC136428.4-201ENST00000634254 1155 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AP002833.3-201ENST00000625075 2265 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 RPL36P18-201ENST00000419316 318 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC002486.2-201ENST00000447806 590 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 NENFP3-201ENST00000503735 313 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 LDHC-205ENST00000537486 583 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC073916.1-201ENST00000545095 130 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS13CQ709C8 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS13CQ709C8 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 MIR8080-201ENST00000622224 89 ntBASIC4.99□□□□□ -1.61
VPS13CQ709C8 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 SRGAP2-217ENST00000624873 4705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 FBXL21-201ENST00000297158 1305 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 C4orf50-201ENST00000324058 5201 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 AL513548.2-201ENST00000602994 1207 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 AL591848.4-201ENST00000567832 3472 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 AC020658.2-201ENST00000559030 4020 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 BCAT1-204ENST00000538118 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 RMST-210ENST00000640149 2844 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 AP000534.2-201ENST00000412729 568 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 SEPT14P12-201ENST00000442280 560 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 OR2AO1P-201ENST00000476497 403 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 AC026826.1-201ENST00000493002 361 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 PTTG3P-201ENST00000521862 606 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 AC022404.1-201ENST00000555320 273 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 MIR4330-201ENST00000579077 105 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms