Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 AL008582.1-201ENST00000609612 442 ntBASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 AL356752.1-201ENST00000615844 593 ntBASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 MIR6849-201ENST00000618543 69 ntBASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 SNX18P10-201ENST00000625014 519 ntBASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.94□□□□□ -1.46
NHLRC1Q6VVB1 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AL353763.1-201ENST00000624467 1628 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 RNA5SP321-201ENST00000362722 111 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AL359694.1-201ENST00000403247 604 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 RN7SKP188-201ENST00000410789 317 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 RN7SKP296-201ENST00000411185 341 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 SPATA20P1-201ENST00000423089 438 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 RPL34P27-201ENST00000428810 349 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AL451136.1-201ENST00000435399 325 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AC009244.1-201ENST00000450566 258 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 RN7SL37P-201ENST00000490461 307 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 SCARNA11.1-201ENST00000516918 132 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AC025857.1-201ENST00000525252 377 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 NF1P10-201ENST00000613227 742 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 NEK2P2-201ENST00000438441 1338 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AL929601.4-201ENST00000613011 1341 ntBASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NHLRC1Q6VVB1 AC110373.1-201ENST00000505994 3505 ntBASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NHLRC1Q6VVB1 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms