Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
LHX1P48742 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.86□□□□□ -1.31
LHX1P48742 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
LHX1P48742 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
LHX1P48742 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.85□□□□□ -1.31
LHX1P48742 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.85□□□□□ -1.31
LHX1P48742 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.85□□□□□ -1.31
LHX1P48742 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
LHX1P48742 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
LHX1P48742 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 NEK2P2-201ENST00000438441 1338 ntBASIC6.85□□□□□ -1.31
LHX1P48742 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.85□□□□□ -1.31
LHX1P48742 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 AL133243.4-201ENST00000623116 3109 ntBASIC6.85□□□□□ -1.31
LHX1P48742 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.85□□□□□ -1.31
LHX1P48742 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.85□□□□□ -1.31
LHX1P48742 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.85□□□□□ -1.31
LHX1P48742 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
LHX1P48742 EEF1B2P3-201ENST00000447718 678 ntBASIC6.85□□□□□ -1.31
LHX1P48742 RN7SL552P-201ENST00000462094 276 ntBASIC6.85□□□□□ -1.31
LHX1P48742 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.85□□□□□ -1.31
LHX1P48742 AC106822.1-201ENST00000502647 526 ntBASIC6.85□□□□□ -1.31
LHX1P48742 AC113367.2-201ENST00000505749 160 ntBASIC6.85□□□□□ -1.31
LHX1P48742 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.85□□□□□ -1.31
LHX1P48742 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.85□□□□□ -1.31
LHX1P48742 AC024405.1-201ENST00000532521 1042 ntBASIC6.85□□□□□ -1.31
LHX1P48742 AC073046.2-201ENST00000604756 527 ntBASIC6.85□□□□□ -1.31
LHX1P48742 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.85□□□□□ -1.31
LHX1P48742 AL132796.3-201ENST00000624703 900 ntBASIC6.85□□□□□ -1.31
LHX1P48742 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.85□□□□□ -1.31
LHX1P48742 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 CASC19-246ENST00000641625 1606 ntBASIC6.85□□□□□ -1.31
LHX1P48742 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
LHX1P48742 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
LHX1P48742 AC013488.1-201ENST00000526618 1838 ntBASIC6.85□□□□□ -1.31
LHX1P48742 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
LHX1P48742 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
LHX1P48742 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
LHX1P48742 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LHX1P48742 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.84□□□□□ -1.31
LHX1P48742 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
LHX1P48742 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
LHX1P48742 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LHX1P48742 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.84□□□□□ -1.31
LHX1P48742 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.84□□□□□ -1.31
LHX1P48742 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
LHX1P48742 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.84□□□□□ -1.31
LHX1P48742 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LHX1P48742 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
LHX1P48742 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.84□□□□□ -1.31
LHX1P48742 RPL11P4-201ENST00000332269 436 ntBASIC6.84□□□□□ -1.31
LHX1P48742 OSTCP4-201ENST00000424397 449 ntBASIC6.84□□□□□ -1.31
LHX1P48742 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.84□□□□□ -1.31
LHX1P48742 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.84□□□□□ -1.31
LHX1P48742 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.84□□□□□ -1.31
LHX1P48742 POU5F1P5-201ENST00000445059 658 ntBASIC6.84□□□□□ -1.31
LHX1P48742 RN7SL643P-201ENST00000471845 291 ntBASIC6.84□□□□□ -1.31
LHX1P48742 RN7SL362P-201ENST00000494228 267 ntBASIC6.84□□□□□ -1.31
LHX1P48742 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.84□□□□□ -1.31
LHX1P48742 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.84□□□□□ -1.31
LHX1P48742 AC106800.3-201ENST00000511389 308 ntBASIC6.84□□□□□ -1.31
LHX1P48742 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.84□□□□□ -1.31
LHX1P48742 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.84□□□□□ -1.31
LHX1P48742 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.84□□□□□ -1.31
LHX1P48742 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.84□□□□□ -1.31
LHX1P48742 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LHX1P48742 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LHX1P48742 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LHX1P48742 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
LHX1P48742 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.84□□□□□ -1.31
LHX1P48742 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.84□□□□□ -1.31
LHX1P48742 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.84□□□□□ -1.31
LHX1P48742 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
LHX1P48742 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
LHX1P48742 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.84□□□□□ -1.31
LHX1P48742 AL117339.4-201ENST00000608335 7063 ntBASIC6.84□□□□□ -1.31
LHX1P48742 TMCC1P1-201ENST00000518897 1980 ntBASIC6.84□□□□□ -1.32
LHX1P48742 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.32
LHX1P48742 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
LHX1P48742 TMEM75-201ENST00000624314 2165 ntBASIC6.84□□□□□ -1.32
LHX1P48742 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.83□□□□□ -1.32
LHX1P48742 NR1H5P-201ENST00000452683 1377 ntBASIC6.83□□□□□ -1.32
LHX1P48742 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LHX1P48742 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LHX1P48742 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
LHX1P48742 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LHX1P48742 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 329.3 ms