Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.71□□□□□ -1.5
UBCP0CG48 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.71□□□□□ -1.5
UBCP0CG48 AC093635.1-201ENST00000609028 555 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.71□□□□□ -1.5
UBCP0CG48 AL035425.4-201ENST00000624509 1063 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UBCP0CG48 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
UBCP0CG48 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.71□□□□□ -1.5
UBCP0CG48 AC005261.2-201ENST00000593427 4258 ntBASIC5.71□□□□□ -1.5
UBCP0CG48 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UBCP0CG48 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
UBCP0CG48 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
UBCP0CG48 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UBCP0CG48 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UBCP0CG48 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.7□□□□□ -1.5
UBCP0CG48 Y_RNA.209-201ENST00000364156 111 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 SNORA11D-201ENST00000408548 128 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 SNORA11E-201ENST00000408778 128 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 RN7SKP161-201ENST00000411110 305 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 AC017078.1-201ENST00000416146 368 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 FDPSP6-201ENST00000425091 512 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 AC021876.1-201ENST00000425959 359 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.7□□□□□ -1.5
UBCP0CG48 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.7□□□□□ -1.5
UBCP0CG48 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.7□□□□□ -1.5
UBCP0CG48 ST13P21-201ENST00000453250 1098 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 RN7SL849P-201ENST00000485236 295 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 RPL21P42-201ENST00000488408 464 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC5.7□□□□□ -1.5
UBCP0CG48 AC010442.1-201ENST00000515583 816 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 AC008429.2-201ENST00000523057 864 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.7□□□□□ -1.5
UBCP0CG48 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.7□□□□□ -1.5
UBCP0CG48 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.7□□□□□ -1.5
UBCP0CG48 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.7□□□□□ -1.5
UBCP0CG48 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.7□□□□□ -1.5
UBCP0CG48 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
UBCP0CG48 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.7□□□□□ -1.5
UBCP0CG48 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
UBCP0CG48 MIR4258-201ENST00000580920 91 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.7□□□□□ -1.5
UBCP0CG48 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.7□□□□□ -1.5
UBCP0CG48 RPS27AP19-201ENST00000597285 458 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.7□□□□□ -1.5
UBCP0CG48 AC024589.2-201ENST00000605642 1294 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 AC116165.3-201ENST00000614524 400 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.7□□□□□ -1.5
UBCP0CG48 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 MIR7854-201ENST00000620068 65 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 AP001264.1-201ENST00000620602 703 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 MRPL57P1-201ENST00000621486 265 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.7□□□□□ -1.5
UBCP0CG48 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UBCP0CG48 AC140479.2-201ENST00000421567 3130 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UBCP0CG48 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
UBCP0CG48 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UBCP0CG48 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UBCP0CG48 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
UBCP0CG48 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
UBCP0CG48 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
UBCP0CG48 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
UBCP0CG48 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.7□□□□□ -1.5
UBCP0CG48 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.7□□□□□ -1.5
UBCP0CG48 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.7□□□□□ -1.5
UBCP0CG48 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.69□□□□□ -1.5
UBCP0CG48 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.69□□□□□ -1.5
UBCP0CG48 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.69□□□□□ -1.5
UBCP0CG48 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.69□□□□□ -1.5
UBCP0CG48 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UBCP0CG48 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
UBCP0CG48 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
UBCP0CG48 AP000432.2-201ENST00000624164 2048 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
UBCP0CG48 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
UBCP0CG48 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.69□□□□□ -1.5
UBCP0CG48 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
UBCP0CG48 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 RNA5SP321-201ENST00000362722 111 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 RNU1-59P-201ENST00000364829 162 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.69□□□□□ -1.5
UBCP0CG48 RNU11-201ENST00000387069 134 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 AL360271.1-201ENST00000395679 510 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UBCP0CG48 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
UBCP0CG48 AC091492.1-201ENST00000419844 272 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UBCP0CG48 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
UBCP0CG48 ETF1P1-206ENST00000427296 984 ntBASIC5.69□□□□□ -1.5
UBCP0CG48 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms