Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL1P09341 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL1P09341 AC010487.1-201ENST00000594408 1172 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 AC092032.1-201ENST00000603090 165 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 BUB1P1-201ENST00000603541 607 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 LSM1P2-201ENST00000604911 322 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC4.92□□□□□ -1.62
CXCL1P09341 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CXCL1P09341 AL161420.1-201ENST00000619393 264 ntBASIC4.92□□□□□ -1.62
CXCL1P09341 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC4.92□□□□□ -1.62
CXCL1P09341 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC4.92□□□□□ -1.62
CXCL1P09341 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
CXCL1P09341 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC4.92□□□□□ -1.62
CXCL1P09341 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CXCL1P09341 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CXCL1P09341 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
CXCL1P09341 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.92□□□□□ -1.62
CXCL1P09341 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
CXCL1P09341 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CXCL1P09341 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 AC114876.1-201ENST00000490962 1366 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 AC140479.2-201ENST00000421567 3130 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CXCL1P09341 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 RNA5SP53-201ENST00000391299 120 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 RAN-201ENST00000392367 780 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 PCNAP3-201ENST00000397222 778 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 OR7E91P-201ENST00000400027 866 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 RN7SKP151-201ENST00000410230 316 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 RN7SKP296-201ENST00000411185 341 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 ZBTB8OSP2-201ENST00000423890 504 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC4.91□□□□□ -1.62
CXCL1P09341 RPS27AP6-201ENST00000427962 448 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 MTND2P40-201ENST00000436718 841 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC4.91□□□□□ -1.62
CXCL1P09341 RPS27AP3-201ENST00000453803 454 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC4.91□□□□□ -1.62
CXCL1P09341 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC4.91□□□□□ -1.62
CXCL1P09341 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC4.91□□□□□ -1.62
CXCL1P09341 RN7SL25P-201ENST00000583862 260 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 AC006116.6-201ENST00000593258 1103 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 AC012640.3-201ENST00000607847 430 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 AL132640.3-201ENST00000630473 177 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CXCL1P09341 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 AL136984.1-201ENST00000607611 1893 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC4.91□□□□□ -1.62
CXCL1P09341 GOT2P1-201ENST00000440922 1309 ntBASIC4.91□□□□□ -1.62
CXCL1P09341 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.91□□□□□ -1.62
CXCL1P09341 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.91□□□□□ -1.62
CXCL1P09341 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CXCL1P09341 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CXCL1P09341 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.9□□□□□ -1.62
CXCL1P09341 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
CXCL1P09341 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CXCL1P09341 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CXCL1P09341 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CXCL1P09341 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CXCL1P09341 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
CXCL1P09341 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.9□□□□□ -1.62
CXCL1P09341 HSP90AA2P-201ENST00000530115 2196 ntBASIC4.9□□□□□ -1.62
CXCL1P09341 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CXCL1P09341 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CXCL1P09341 GMFG-201ENST00000253054 616 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms