Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.82□□□□□ -1.48
COPS3Q9UNS2 AL583832.1-201ENST00000603227 784 ntBASIC5.82□□□□□ -1.48
COPS3Q9UNS2 MIR6726-201ENST00000613751 61 ntBASIC5.82□□□□□ -1.48
COPS3Q9UNS2 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.82□□□□□ -1.48
COPS3Q9UNS2 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COPS3Q9UNS2 MRPL57P1-201ENST00000621486 265 ntBASIC5.82□□□□□ -1.48
COPS3Q9UNS2 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPS3Q9UNS2 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COPS3Q9UNS2 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.82□□□□□ -1.48
COPS3Q9UNS2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPS3Q9UNS2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
COPS3Q9UNS2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.82□□□□□ -1.48
COPS3Q9UNS2 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPS3Q9UNS2 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPS3Q9UNS2 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.81□□□□□ -1.48
COPS3Q9UNS2 RPL12P10-201ENST00000413498 498 ntBASIC5.81□□□□□ -1.48
COPS3Q9UNS2 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 CYCSP52-201ENST00000422857 310 ntBASIC5.81□□□□□ -1.48
COPS3Q9UNS2 RN7SL456P-201ENST00000469290 295 ntBASIC5.81□□□□□ -1.48
COPS3Q9UNS2 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 AP001804.1-201ENST00000526868 919 ntBASIC5.81□□□□□ -1.48
COPS3Q9UNS2 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 PSMC1P8-201ENST00000536820 1296 ntBASIC5.81□□□□□ -1.48
COPS3Q9UNS2 NF1P12-201ENST00000549593 583 ntBASIC5.81□□□□□ -1.48
COPS3Q9UNS2 AL121579.2-201ENST00000555466 590 ntBASIC5.81□□□□□ -1.48
COPS3Q9UNS2 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 AL121782.1-201ENST00000611242 413 ntBASIC5.81□□□□□ -1.48
COPS3Q9UNS2 PTCHD3P1-201ENST00000612350 537 ntBASIC5.81□□□□□ -1.48
COPS3Q9UNS2 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.81□□□□□ -1.48
COPS3Q9UNS2 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COPS3Q9UNS2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 HSPD1P8-201ENST00000400121 1658 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 RN7SKP189-201ENST00000365042 330 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 RNA5SP442-201ENST00000365050 107 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 RNU6-673P-201ENST00000365084 104 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 MIR99A-201ENST00000384906 81 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 RNU11-201ENST00000387069 134 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 U3.23-201ENST00000391132 200 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AC121334.1-201ENST00000396414 802 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 SOD1P1-201ENST00000407803 440 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 RN7SL492P-201ENST00000460700 295 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AC010442.1-201ENST00000515583 816 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 IGKV2D-38-201ENST00000518423 240 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 WDR45BP1-201ENST00000583470 1029 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AL360012.1-201ENST00000602813 131 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 MIR6829-201ENST00000620375 67 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AP001264.1-201ENST00000620602 703 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms