Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 U3.52-201ENST00000384034 216 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC097463.1-201ENST00000447288 481 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 CBX1-205ENST00000495350 550 ntTSL 2 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC091849.1-201ENST00000509920 121 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AP005597.2-201ENST00000526238 341 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 NPIPB14P-203ENST00000532298 987 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 MT1B-202ENST00000562399 351 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 MIR6886-201ENST00000619864 61 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 OR7E25P-201ENST00000344844 931 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 RN7SKP232-201ENST00000410170 290 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 HMGN1P6-201ENST00000438508 291 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AL020997.1-201ENST00000446554 349 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 RN7SL39P-201ENST00000462264 297 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC010327.2-201ENST00000587647 488 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 Six3os1_1.1-201ENST00000620900 87 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 RPL5P34-201ENST00000426545 891 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 PSMA6P2-201ENST00000457574 686 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC021006.1-201ENST00000489849 553 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 RNA5SP278-201ENST00000517055 102 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 RN7SL199P-201ENST00000578752 281 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 RN7SL656P-201ENST00000579044 281 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 RN7SL270P-201ENST00000579643 281 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 Z93929.1-201ENST00000418200 1475 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 RPS4XP14-201ENST00000493072 781 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 H3F3AP3-201ENST00000497682 407 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 AC004805.3-201ENST00000603178 310 ntBASIC2.01□□□□□ -2.09
SYNE1Q8NF91 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SYNE1Q8NF91 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC2□□□□□ -2.09
SYNE1Q8NF91 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
SYNE1Q8NF91 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC2□□□□□ -2.09
SYNE1Q8NF91 AC009135.2-201ENST00000624136 1768 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 FIG4-202ENST00000368941 791 ntTSL 3 BASIC2□□□□□ -2.09
SYNE1Q8NF91 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SYNE1Q8NF91 GPN3P1-201ENST00000423883 535 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC2□□□□□ -2.09
SYNE1Q8NF91 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC2□□□□□ -2.09
SYNE1Q8NF91 AC133965.1-201ENST00000452984 354 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 AC068228.1-201ENST00000461723 211 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 RN7SKP196-201ENST00000516267 345 ntBASIC2□□□□□ -2.09
SYNE1Q8NF91 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms