Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TRIM5-201ENST00000380027 2290 ntTSL 5 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC007614.2-201ENST00000569877 1851 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 CLIP1-218ENST00000545889 4633 ntTSL 5 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 Z93929.1-201ENST00000418200 1475 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 RACK1-201ENST00000376817 965 ntTSL 5 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 RNU6-549P-201ENST00000384433 107 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 SNORA57.2-201ENST00000391265 128 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC007068.1-201ENST00000396690 844 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 RPS27AP11-201ENST00000402798 447 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 RPL23AP39-201ENST00000415533 405 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 LINC00993-201ENST00000420453 540 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AL158214.1-201ENST00000444423 404 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AL365436.1-201ENST00000452587 495 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AL109809.3-201ENST00000456875 246 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC021678.1-201ENST00000505195 936 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 HSD3BP4-201ENST00000511509 1120 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 MTND6P20-201ENST00000522986 418 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 NPM1P5-201ENST00000557228 838 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 RPS3AP23-202ENST00000574601 686 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AL691432.1-202ENST00000597891 502 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 SEPT7P9-203ENST00000604116 343 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AL021808.1-201ENST00000604325 1117 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AL121917.2-201ENST00000605044 390 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AL020991.1-201ENST00000612314 373 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AL122125.1-201ENST00000616999 600 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 MOBP-201ENST00000311042 3388 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC127459.1-201ENST00000563129 2768 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC013268.3-201ENST00000262716 2324 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AL645937.1-201ENST00000641739 1652 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 MIR614-201ENST00000385082 90 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 RPS26P38-201ENST00000414476 348 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC007390.1-201ENST00000415722 356 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 TAF13P2-201ENST00000416876 286 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 ASS1P5-201ENST00000435496 1239 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC096632.2-201ENST00000438139 1239 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 FDPSP8-201ENST00000438304 1089 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 ARMC4P1-201ENST00000438905 707 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 RPS27AP2-201ENST00000457576 465 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 PMCHL2-203ENST00000457791 237 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 RPL5P24-201ENST00000463742 885 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 PGBD4P1-201ENST00000473644 407 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 RN7SL403P-201ENST00000481783 305 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC018695.1-201ENST00000484096 664 ntBASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms