Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC11.16□□□□□ -0.62
SMARCA4P51532 Z83820.1-201ENST00000456978 1499 ntBASIC11.16□□□□□ -0.62
SMARCA4P51532 MELK-211ENST00000545008 2236 ntTSL 2 BASIC11.15□□□□□ -0.62
SMARCA4P51532 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMARCA4P51532 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMARCA4P51532 OFD1P17-201ENST00000437639 3018 ntBASIC11.15□□□□□ -0.62
SMARCA4P51532 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SMARCA4P51532 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMARCA4P51532 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMARCA4P51532 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SMARCA4P51532 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC11.15□□□□□ -0.62
SMARCA4P51532 DUTP4-201ENST00000424782 475 ntBASIC11.15□□□□□ -0.62
SMARCA4P51532 SEPT14P12-201ENST00000442280 560 ntBASIC11.15□□□□□ -0.62
SMARCA4P51532 AL139156.3-201ENST00000454802 394 ntBASIC11.15□□□□□ -0.62
SMARCA4P51532 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC11.15□□□□□ -0.62
SMARCA4P51532 AL589674.2-201ENST00000604304 337 ntBASIC11.15□□□□□ -0.62
SMARCA4P51532 AC012254.3-201ENST00000591183 2117 ntBASIC11.15□□□□□ -0.62
SMARCA4P51532 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC11.15□□□□□ -0.62
SMARCA4P51532 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
SMARCA4P51532 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SMARCA4P51532 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC11.15□□□□□ -0.63
SMARCA4P51532 SPATA31B1P-201ENST00000434692 4016 ntBASIC11.14□□□□□ -0.63
SMARCA4P51532 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMARCA4P51532 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMARCA4P51532 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMARCA4P51532 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
SMARCA4P51532 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
SMARCA4P51532 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC11.14□□□□□ -0.63
SMARCA4P51532 NPM1P22-201ENST00000427761 952 ntBASIC11.14□□□□□ -0.63
SMARCA4P51532 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC11.14□□□□□ -0.63
SMARCA4P51532 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC11.14□□□□□ -0.63
SMARCA4P51532 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMARCA4P51532 RPA2P3-201ENST00000533268 770 ntBASIC11.14□□□□□ -0.63
SMARCA4P51532 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMARCA4P51532 AC005244.1-201ENST00000582566 339 ntBASIC11.14□□□□□ -0.63
SMARCA4P51532 AL136295.6-201ENST00000610486 658 ntBASIC11.14□□□□□ -0.63
SMARCA4P51532 AC027348.2-201ENST00000624375 642 ntBASIC11.14□□□□□ -0.63
SMARCA4P51532 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
SMARCA4P51532 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMARCA4P51532 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMARCA4P51532 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC11.14□□□□□ -0.63
SMARCA4P51532 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC11.14□□□□□ -0.63
SMARCA4P51532 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMARCA4P51532 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMARCA4P51532 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SMARCA4P51532 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SMARCA4P51532 AC119674.1-202ENST00000641333 1860 ntBASIC11.13□□□□□ -0.63
SMARCA4P51532 MIR541-201ENST00000401360 84 ntBASIC11.13□□□□□ -0.63
SMARCA4P51532 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SMARCA4P51532 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 AC006499.3-201ENST00000506077 748 ntBASIC11.13□□□□□ -0.63
SMARCA4P51532 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC11.13□□□□□ -0.63
SMARCA4P51532 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC11.13□□□□□ -0.63
SMARCA4P51532 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC11.13□□□□□ -0.63
SMARCA4P51532 AC022404.1-201ENST00000555320 273 ntBASIC11.13□□□□□ -0.63
SMARCA4P51532 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC11.13□□□□□ -0.63
SMARCA4P51532 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC11.13□□□□□ -0.63
SMARCA4P51532 MIR4776-2-201ENST00000580204 80 ntBASIC11.13□□□□□ -0.63
SMARCA4P51532 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC11.13□□□□□ -0.63
SMARCA4P51532 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SMARCA4P51532 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 FTX-215ENST00000638681 9771 ntTSL 5 BASIC11.13□□□□□ -0.63
SMARCA4P51532 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC11.13□□□□□ -0.63
SMARCA4P51532 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 RN7SKP162-201ENST00000363605 345 ntBASIC11.13□□□□□ -0.63
SMARCA4P51532 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC11.13□□□□□ -0.63
SMARCA4P51532 RPL34P3-201ENST00000421454 338 ntBASIC11.13□□□□□ -0.63
SMARCA4P51532 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SMARCA4P51532 VN1R38P-201ENST00000450265 887 ntBASIC11.13□□□□□ -0.63
SMARCA4P51532 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC11.13□□□□□ -0.63
SMARCA4P51532 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC11.13□□□□□ -0.63
SMARCA4P51532 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC11.12□□□□□ -0.63
SMARCA4P51532 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMARCA4P51532 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMARCA4P51532 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC11.12□□□□□ -0.63
SMARCA4P51532 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SMARCA4P51532 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMARCA4P51532 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC11.12□□□□□ -0.63
SMARCA4P51532 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMARCA4P51532 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
SMARCA4P51532 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC11.12□□□□□ -0.63
SMARCA4P51532 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC11.12□□□□□ -0.63
SMARCA4P51532 AC002504.1-201ENST00000438281 691 ntBASIC11.12□□□□□ -0.63
SMARCA4P51532 AC091965.3-201ENST00000506236 208 ntBASIC11.12□□□□□ -0.63
SMARCA4P51532 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC11.12□□□□□ -0.63
SMARCA4P51532 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMARCA4P51532 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMARCA4P51532 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMARCA4P51532 NEPNP-201ENST00000404786 1371 ntBASIC11.12□□□□□ -0.63
SMARCA4P51532 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms