Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC140063.1-201ENST00000541343 259 ntBASIC6.51□□□□□ -1.37
CAPN1P07384 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.51□□□□□ -1.37
CAPN1P07384 MIR3157-201ENST00000578688 85 ntBASIC6.51□□□□□ -1.37
CAPN1P07384 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.51□□□□□ -1.37
CAPN1P07384 AC067852.5-201ENST00000589299 310 ntBASIC6.51□□□□□ -1.37
CAPN1P07384 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.51□□□□□ -1.37
CAPN1P07384 AC012653.2-201ENST00000621880 420 ntBASIC6.51□□□□□ -1.37
CAPN1P07384 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.51□□□□□ -1.37
CAPN1P07384 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.51□□□□□ -1.37
CAPN1P07384 AC063952.1-203ENST00000634410 658 ntBASIC6.51□□□□□ -1.37
CAPN1P07384 AC007603.3-201ENST00000636915 979 ntBASIC6.51□□□□□ -1.37
CAPN1P07384 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.51□□□□□ -1.37
CAPN1P07384 ZNF969P-201ENST00000510345 2341 ntBASIC6.51□□□□□ -1.37
CAPN1P07384 OR5M2P-202ENST00000641241 4242 ntBASIC6.51□□□□□ -1.37
CAPN1P07384 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.51□□□□□ -1.37
CAPN1P07384 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CAPN1P07384 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CAPN1P07384 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.51□□□□□ -1.37
CAPN1P07384 MKI67P1-201ENST00000604297 1460 ntBASIC6.51□□□□□ -1.37
CAPN1P07384 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CAPN1P07384 MTCO1P25-201ENST00000414449 1799 ntBASIC6.51□□□□□ -1.37
CAPN1P07384 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CAPN1P07384 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
CAPN1P07384 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CAPN1P07384 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CAPN1P07384 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.51□□□□□ -1.37
CAPN1P07384 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CAPN1P07384 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.5□□□□□ -1.37
CAPN1P07384 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.5□□□□□ -1.37
CAPN1P07384 AP002370.1-201ENST00000528055 1602 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 AL359694.2-201ENST00000567753 1615 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CAPN1P07384 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CAPN1P07384 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CAPN1P07384 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.5□□□□□ -1.37
CAPN1P07384 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 AC010894.1-201ENST00000313760 361 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CAPN1P07384 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CAPN1P07384 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 RN7SKP146-201ENST00000410242 334 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.5□□□□□ -1.37
CAPN1P07384 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
CAPN1P07384 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.5□□□□□ -1.37
CAPN1P07384 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.5□□□□□ -1.37
CAPN1P07384 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CAPN1P07384 LDHBP3-201ENST00000514909 822 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 IGKV2D-38-201ENST00000518423 240 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 IGHV3-57-201ENST00000520143 280 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.5□□□□□ -1.37
CAPN1P07384 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.5□□□□□ -1.37
CAPN1P07384 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 RPL7AP69-201ENST00000595306 806 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 AL034374.2-201ENST00000605281 548 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.5□□□□□ -1.37
CAPN1P07384 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 AC005393.1-201ENST00000617916 584 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 CLUHP10-201ENST00000631979 980 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 AC027559.1-201ENST00000636288 271 ntBASIC6.5□□□□□ -1.37
CAPN1P07384 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CAPN1P07384 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.5□□□□□ -1.37
CAPN1P07384 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.5□□□□□ -1.37
CAPN1P07384 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.5□□□□□ -1.37
CAPN1P07384 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.5□□□□□ -1.37
CAPN1P07384 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CAPN1P07384 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
CAPN1P07384 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CAPN1P07384 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.49□□□□□ -1.37
CAPN1P07384 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CAPN1P07384 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CAPN1P07384 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CAPN1P07384 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.49□□□□□ -1.37
CAPN1P07384 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CAPN1P07384 AL391261.1-201ENST00000555712 1479 ntBASIC6.49□□□□□ -1.37
CAPN1P07384 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CAPN1P07384 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CAPN1P07384 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CAPN1P07384 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CAPN1P07384 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CAPN1P07384 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CAPN1P07384 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CAPN1P07384 NR1H5P-201ENST00000452683 1377 ntBASIC6.49□□□□□ -1.37
CAPN1P07384 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
CAPN1P07384 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CAPN1P07384 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CAPN1P07384 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CAPN1P07384 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms