Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL390728.3-201ENST00000452704 270 ntBASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 MEF2AP1-201ENST00000454867 863 ntBASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 ATG10-AS1-201ENST00000504846 648 ntBASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 AC091849.1-201ENST00000509920 121 ntBASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 AC005363.1-201ENST00000530779 351 ntBASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 AC140063.1-201ENST00000541343 259 ntBASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 AL136520.1-202ENST00000555494 763 ntBASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 AC063977.7-201ENST00000594454 337 ntBASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 AC091133.5-201ENST00000603088 301 ntBASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CCDC187A0A096LP49 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 SMG1P5-202ENST00000529428 4219 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 SMG1P2-201ENST00000566127 4221 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 STAG3L4-201ENST00000352103 530 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 RNA5SP512-201ENST00000364550 120 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 RN7SKP47-201ENST00000365347 328 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 OR1F12-201ENST00000402365 945 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 RPL12P23-201ENST00000405880 490 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AL360013.1-201ENST00000419031 858 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 PAICSP2-201ENST00000429118 1150 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 UBBP5-201ENST00000446970 266 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 RPL23AP28-201ENST00000448062 470 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC144530.1-201ENST00000452862 555 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 GLRXP3-201ENST00000470810 321 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC021006.1-201ENST00000489849 553 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 ANP32BP1-202ENST00000568553 737 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 NPM1P45-201ENST00000583151 559 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC107993.1-201ENST00000591343 684 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AL078623.1-201ENST00000602702 907 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 AL137058.3-201ENST00000624531 3099 ntBASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC187A0A096LP49 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC187A0A096LP49 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC187A0A096LP49 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC187A0A096LP49 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC187A0A096LP49 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms