Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC012507.3-201ENST00000603556 477 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AL356458.1-201ENST00000604764 465 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC018695.5-201ENST00000605872 315 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 Metazoa_SRP.190-201ENST00000620330 287 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC139792.3-201ENST00000623525 224 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC011472.5-201ENST00000624079 508 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC110769.3-201ENST00000624567 1173 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 TSHZ2-205ENST00000626626 670 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 OR5G5P-204ENST00000627642 621 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC110994.2-201ENST00000635481 492 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AC084879.1-201ENST00000636165 1201 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 LINC01835-203ENST00000639800 567 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 ATP8A2P2-201ENST00000437678 1568 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 FARSBP1-201ENST00000435808 1778 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 AL353795.1-201ENST00000439134 1775 ntBASIC8.04□□□□□ -1.12
USB1Q9BQ65 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
USB1Q9BQ65 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
USB1Q9BQ65 KRTAP9-6-201ENST00000391355 1303 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 USP46-207ENST00000508499 1419 ntTSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC015689.2-201ENST00000528172 1738 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 CU634019.1-201ENST00000623095 2247 ntTSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 CU633904.1-202ENST00000625096 2247 ntTSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AL392183.1-201ENST00000606622 2436 ntTSL 4 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USB1Q9BQ65 SERPINB2-205ENST00000457692 2155 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC090616.7-201ENST00000625123 2179 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC009053.1-202ENST00000563377 2051 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 DDX18P6-201ENST00000450119 1997 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USB1Q9BQ65 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USB1Q9BQ65 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 TNFAIP8-201ENST00000274456 795 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
USB1Q9BQ65 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 SNORD83A-201ENST00000386747 95 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 TRAV20-201ENST00000390448 406 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 OR4K12P-201ENST00000406538 961 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 RNU6-77P-201ENST00000410554 91 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC068138.1-201ENST00000412635 217 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 OR5P4P-201ENST00000424698 917 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC127526.2-201ENST00000426436 775 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 AL592114.3-201ENST00000437919 446 ntTSL 3 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AL355537.1-201ENST00000446589 450 ntTSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 LINC01696-201ENST00000448988 492 ntTSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 TSSK1A-201ENST00000450724 768 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 MYB-AS1-201ENST00000455534 449 ntTSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 OR7E7P-201ENST00000455678 1012 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 RN7SL520P-201ENST00000474110 286 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USB1Q9BQ65 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USB1Q9BQ65 TDGF1P3-201ENST00000493351 567 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 TPT1P5-201ENST00000511433 521 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC108064.1-201ENST00000513791 460 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 UBE2Q2P10-201ENST00000514854 900 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 RNU6-416P-201ENST00000516265 103 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 RNU4ATAC12P-201ENST00000516460 113 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC124290.2-201ENST00000519431 286 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 IGJP1-201ENST00000522682 475 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
USB1Q9BQ65 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
USB1Q9BQ65 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 ZNF213-AS1-208ENST00000575139 530 ntTSL 4 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC008569.2-201ENST00000589702 889 ntTSL 5 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 PRELID3BP8-201ENST00000604148 295 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AP001521.2-201ENST00000608772 546 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC093788.1-201ENST00000609356 927 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC105429.2-201ENST00000610567 517 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC007450.2-201ENST00000614160 290 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 SYN3-213ENST00000619146 561 ntTSL 5 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 AC116563.2-201ENST00000624751 535 ntBASIC8.03□□□□□ -1.12
USB1Q9BQ65 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 NAT10-210ENST00000615292 3329 ntTSL 5 BASIC8.03□□□□□ -1.12
USB1Q9BQ65 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms