Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL138693.1-201ENST00000622219 129 ntBASIC7.14□□□□□ -1.27
CDK5RAP1Q96SZ6 AC127071.2-201ENST00000623293 527 ntBASIC7.14□□□□□ -1.27
CDK5RAP1Q96SZ6 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.14□□□□□ -1.27
CDK5RAP1Q96SZ6 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP1Q96SZ6 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP1Q96SZ6 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC7.14□□□□□ -1.27
CDK5RAP1Q96SZ6 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CDK5RAP1Q96SZ6 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CDK5RAP1Q96SZ6 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 OGFOD1P1-201ENST00000447552 1592 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 UBBP1-201ENST00000392399 473 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 RN7SKP271-201ENST00000410528 320 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AL663061.1-201ENST00000416625 580 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 MTND2P16-201ENST00000419987 799 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 SPATA20P1-201ENST00000423089 438 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 MORF4L1P5-201ENST00000433352 961 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 E2F6P3-201ENST00000441743 743 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AL356121.1-201ENST00000442911 156 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 RPSAP24-201ENST00000461543 873 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 RN7SL502P-201ENST00000481857 290 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 RN7SL187P-201ENST00000495587 303 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AC114324.2-202ENST00000503812 134 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AC005351.1-201ENST00000511152 786 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 MRPS5P3-201ENST00000515577 166 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 RN7SL339P-201ENST00000580597 296 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AC013444.2-201ENST00000603317 787 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AL590032.1-201ENST00000604920 252 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 BNIP3P7-201ENST00000605641 516 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 AP001157.1-201ENST00000550837 2339 ntBASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.13□□□□□ -1.27
CDK5RAP1Q96SZ6 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AC092634.1-201ENST00000366505 199 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 AL034417.1-201ENST00000399343 800 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 CYCSP17-201ENST00000407870 315 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 MIR1266-201ENST00000408125 84 ntBASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CDK5RAP1Q96SZ6 RN7SKP205-201ENST00000410999 307 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms