Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 FAM27E4-201ENST00000605259 342 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC005840.5-201ENST00000619166 599 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 TNPO1P2-201ENST00000426249 2665 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 MAPK10-262ENST00000641051 5738 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 GAPDHP23-201ENST00000444823 993 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 AP000547.1-201ENST00000454360 617 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AL021918.2-201ENST00000613415 194 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC090510.2-201ENST00000617465 629 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AL133270.1-201ENST00000402635 279 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 KIF4CP-201ENST00000422742 1279 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 IGKV1OR10-1-201ENST00000442306 329 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 FTLP8-201ENST00000446770 267 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 RPL35AP19-201ENST00000469425 329 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC091965.3-201ENST00000506236 208 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 CR383656.6-201ENST00000550518 394 ntBASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 PFKM-232ENST00000629846 381 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS13CQ709C8 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 AL159987.1-201ENST00000347911 293 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 AL450023.1-201ENST00000450868 751 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 CDC42P3-201ENST00000518493 633 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 AC074050.1-201ENST00000563247 211 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 AC073342.3-201ENST00000624211 193 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 AL161756.3-201ENST00000641216 2071 ntBASIC5.01□□□□□ -1.61
VPS13CQ709C8 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
VPS13CQ709C8 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13CQ709C8 ZNF608-203ENST00000504926 4726 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms