Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 EEF1B2P8-201ENST00000414101 671 ntBASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 RPSAP39-201ENST00000467439 883 ntBASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 SETP21-201ENST00000514799 892 ntBASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 AC004477.3-201ENST00000614061 590 ntBASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42BPAQ5VT25 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 AC104447.1-201ENST00000624214 2124 ntBASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 MIR323A-201ENST00000362199 86 ntBASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 RNA5SP156-201ENST00000410250 110 ntBASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 BX323845.3-201ENST00000428215 527 ntBASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 FTLP8-201ENST00000446770 267 ntBASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 AL445665.1-202ENST00000452436 324 ntBASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 OR13C1P-201ENST00000457612 963 ntBASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 AC135626.1-201ENST00000556983 435 ntBASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
CDC42BPAQ5VT25 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42BPAQ5VT25 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC9.46□□□□□ -0.9
CDC42BPAQ5VT25 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42BPAQ5VT25 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42BPAQ5VT25 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42BPAQ5VT25 AF131215.2-201ENST00000531549 1710 ntBASIC9.46□□□□□ -0.9
CDC42BPAQ5VT25 AC119674.1-202ENST00000641333 1860 ntBASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 KIF4CP-201ENST00000422742 1279 ntBASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 AL512637.1-201ENST00000439523 1231 ntBASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 AL445466.1-201ENST00000448432 357 ntBASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 CGA-206ENST00000630630 832 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 AC011416.1-201ENST00000514947 1732 ntBASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 RN7SKP278-201ENST00000410504 342 ntBASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 SLC25A14P1-201ENST00000502867 901 ntBASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 ZNF322P1-201ENST00000568013 1209 ntBASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 MIR4489-201ENST00000578869 62 ntBASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC9.45□□□□□ -0.9
CDC42BPAQ5VT25 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms