Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC78A2IDD5 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC78A2IDD5 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.89□□□□□ -1.31
CCDC78A2IDD5 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
CCDC78A2IDD5 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
CCDC78A2IDD5 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC78A2IDD5 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC004014.2-201ENST00000623718 5122 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC010401.2-201ENST00000575137 4934 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 CDY10P-201ENST00000452415 1567 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC102941.1-201ENST00000567616 1537 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 CYP2G2P-201ENST00000594920 1485 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 RNA5SP65-201ENST00000363166 119 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 SOD1P1-201ENST00000407803 440 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC114402.2-201ENST00000432760 643 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 SEPT14P12-201ENST00000442280 560 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AL022319.1-201ENST00000458183 1167 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 RN7SL149P-201ENST00000465197 281 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 PPP1R2P6-201ENST00000478565 588 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC021220.1-201ENST00000507445 630 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC093325.1-201ENST00000508378 326 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC010460.2-201ENST00000509054 677 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC069240.2-201ENST00000550242 609 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 PPIAP6-201ENST00000557078 499 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC245884.10-201ENST00000597355 337 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC135803.1-201ENST00000608748 565 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC063944.3-201ENST00000609969 533 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC048344.4-201ENST00000619744 527 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AL354718.1-201ENST00000619764 589 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC131009.3-201ENST00000621809 287 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AC020763.5-201ENST00000623298 430 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.88□□□□□ -1.31
CCDC78A2IDD5 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC78A2IDD5 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 NEK2P4-201ENST00000425793 1329 ntBASIC6.87□□□□□ -1.31
CCDC78A2IDD5 AL512310.3-201ENST00000547023 1335 ntBASIC6.87□□□□□ -1.31
CCDC78A2IDD5 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC78A2IDD5 AL589655.1-201ENST00000405398 482 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms