Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 MIR193BHG-214ENST00000641765 509 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 ECD-205ENST00000454759 2084 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 OR7E122P-202ENST00000641144 6171 ntBASIC6.05□□□□□ -1.44
CHD8Q9HCK8 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CHD8Q9HCK8 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 RACGAP1P-201ENST00000550663 1879 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 ERG-206ENST00000398911 4914 ntTSL 5 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 YES1P1-201ENST00000418510 1628 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 NRBF2P2-201ENST00000413087 861 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 PSMD10P3-201ENST00000437000 448 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AC073909.1-201ENST00000447112 999 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AC234771.3-201ENST00000454984 622 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 RN7SL808P-201ENST00000496066 299 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 MTND6P8-201ENST00000503471 522 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AL445222.1-201ENST00000607259 628 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AC016717.3-201ENST00000624730 554 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AC010132.2-201ENST00000295493 1043 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 RNU6-1055P-201ENST00000391085 107 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AC004825.1-201ENST00000555068 586 ntBASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CHD8Q9HCK8 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 MAGEE2-201ENST00000373359 2249 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 SNORA70.3-201ENST00000365075 132 ntBASIC6.03□□□□□ -1.44
CHD8Q9HCK8 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 AC006511.2-201ENST00000388966 660 ntBASIC6.03□□□□□ -1.44
CHD8Q9HCK8 RN7SKP281-201ENST00000410472 352 ntBASIC6.03□□□□□ -1.44
CHD8Q9HCK8 RN7SKP273-201ENST00000411392 314 ntBASIC6.03□□□□□ -1.44
CHD8Q9HCK8 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 RPA2P1-201ENST00000556557 721 ntBASIC6.03□□□□□ -1.44
CHD8Q9HCK8 AP005119.1-201ENST00000580956 292 ntBASIC6.03□□□□□ -1.44
CHD8Q9HCK8 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.03□□□□□ -1.44
CHD8Q9HCK8 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 AC132219.2-201ENST00000624416 2327 ntBASIC6.03□□□□□ -1.44
CHD8Q9HCK8 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 SALL1P1-201ENST00000438101 3837 ntBASIC6.03□□□□□ -1.44
CHD8Q9HCK8 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
CHD8Q9HCK8 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms