Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC102941.1-201ENST00000567616 1537 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 RNA5SP350-201ENST00000363298 111 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 SNORA55-201ENST00000364587 135 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 RNU1-46P-201ENST00000384425 164 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 PEX12P1-201ENST00000400284 1048 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 RN7SKP17-201ENST00000411242 351 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AL354868.1-201ENST00000417077 482 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 REREP1Y-201ENST00000422655 198 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AL139415.1-201ENST00000424862 352 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC239367.3-201ENST00000428996 814 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 Z68868.1-201ENST00000429048 544 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 REREP2Y-201ENST00000439103 200 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC090954.1-201ENST00000445502 361 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 HIST1H2APS6-201ENST00000448609 364 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 RPLP0P1-201ENST00000457002 361 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 RPS2P25-201ENST00000467247 580 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 RN7SL228P-201ENST00000470060 303 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 RN7SL379P-201ENST00000479912 293 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 RPL23AP80-201ENST00000495605 424 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 CHCHD2P7-201ENST00000508008 452 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC083906.1-201ENST00000509298 406 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 NACAP6-201ENST00000509572 622 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 RNA5SP518-201ENST00000515957 119 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AP003084.1-201ENST00000524828 742 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AP005639.1-201ENST00000526939 192 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 MIR3689C-201ENST00000581239 72 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AP001120.4-201ENST00000590231 108 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AL136139.1-201ENST00000605568 222 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC097641.3-201ENST00000613523 464 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC005393.1-201ENST00000617916 584 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC012100.3-201ENST00000624738 575 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 DLEU2L-201ENST00000371086 3555 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AP002800.1-201ENST00000624982 2225 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 AC093844.1-201ENST00000514910 1361 ntBASIC4.89□□□□□ -1.63
AP1S3Q96PC3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP1S3Q96PC3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 ATP5BP1-201ENST00000411980 1574 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 NPM1P14-201ENST00000343743 866 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 RNU1-55P-201ENST00000365510 158 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AL050335.1-201ENST00000396909 869 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 PCNAP3-201ENST00000397222 778 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC009237.9-201ENST00000414800 347 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms