Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC007485.2-201ENST00000623493 1667 ntBASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AL049697.3-201ENST00000406493 982 ntBASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC017035.1-201ENST00000411999 1115 ntBASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC245047.1-201ENST00000433276 873 ntBASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC016724.1-201ENST00000453215 421 ntBASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 SNX18P24-201ENST00000505249 671 ntBASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 OR7E99P-201ENST00000505750 922 ntBASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 CYCSP25-201ENST00000525280 316 ntBASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 AC104966.1-201ENST00000467010 1464 ntBASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 SAGE3P-201ENST00000619800 1635 ntBASIC7.6□□□□□ -1.19
SHROOM1Q2M3G4 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 RN7SKP275-201ENST00000364626 301 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 DUTP4-201ENST00000424782 475 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 NAP1L4P2-201ENST00000425958 899 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 AC069154.1-201ENST00000432914 542 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 IGKV3D-25-201ENST00000519599 235 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 NPIPB14P-203ENST00000532298 987 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 RN7SL404P-201ENST00000582421 281 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 AC079315.1-201ENST00000602952 623 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 AL080312.2-201ENST00000613001 630 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 MIR6085-201ENST00000618314 110 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 AL136531.3-201ENST00000624378 3658 ntBASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SHROOM1Q2M3G4 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
SHROOM1Q2M3G4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
SHROOM1Q2M3G4 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 LYPLA1P3-201ENST00000402650 695 ntBASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 PNKDP1-201ENST00000435914 430 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 293 ms