Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DMAP28067 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 SNORA70.3-201ENST00000365075 132 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 RNU1-55P-201ENST00000365510 158 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DMAP28067 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 PPIAP26-201ENST00000377951 522 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 CYCSP52-201ENST00000422857 310 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 VTI1BP4-201ENST00000427516 527 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DMAP28067 Z68868.1-201ENST00000429048 544 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 NEK2P2-201ENST00000438441 1338 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DMAP28067 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DMAP28067 GOT2P2-201ENST00000450663 1251 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 SNX18P26-201ENST00000458433 740 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 RN7SL213P-201ENST00000463482 317 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 RPS2P25-201ENST00000467247 580 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AL035690.1-201ENST00000490892 383 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC100854.1-201ENST00000520351 341 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 IGLVI-70-201ENST00000523272 390 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 NPM1P42-201ENST00000560329 862 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 NQO1-205ENST00000561500 891 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC010401.2-201ENST00000575137 4934 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 MIR4433B-201ENST00000581329 102 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC233702.7-202ENST00000582941 211 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC061975.3-201ENST00000583209 244 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AL157899.1-201ENST00000604110 936 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 RPL12P48-201ENST00000605620 304 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC004241.2-201ENST00000614562 444 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC069234.4-201ENST00000621276 412 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DMAP28067 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DMAP28067 AC109446.4-201ENST00000623235 2755 ntBASIC5.61□□□□□ -1.51
HLA-DMAP28067 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC099654.3-201ENST00000447087 1546 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC102941.1-201ENST00000567616 1537 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 RNU4-81P-201ENST00000363561 144 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 PEX12P1-201ENST00000400284 1048 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 ZBTB8OSP2-201ENST00000423890 504 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC007365.2-201ENST00000428806 458 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 PAICSP2-201ENST00000429118 1150 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC092106.2-201ENST00000436597 487 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DMAP28067 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 HIST1H2APS6-201ENST00000448609 364 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 VN1R38P-201ENST00000450265 887 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC022730.1-201ENST00000473114 568 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 RN7SL518P-201ENST00000491887 280 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 NPM1P28-201ENST00000492269 840 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 RN7SL608P-201ENST00000492377 279 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 SNORA70.11-201ENST00000515987 138 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 SNORA70.13-201ENST00000516116 138 ntBASIC5.6□□□□□ -1.51
HLA-DMAP28067 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DMAP28067 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms