Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 HES2-205ENST00000487437 968 ntTSL 3 BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CLIC4Q9Y696 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLIC4Q9Y696 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CLIC4Q9Y696 PHGDH-210ENST00000641115 1638 ntBASIC22.64■■□□□ 1.22
CLIC4Q9Y696 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLIC4Q9Y696 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CLIC4Q9Y696 AC005332.7-201ENST00000614046 2005 ntBASIC22.64■■□□□ 1.22
CLIC4Q9Y696 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CLIC4Q9Y696 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.21
CLIC4Q9Y696 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 AP001271.2-201ENST00000624018 1556 ntBASIC22.63■■□□□ 1.21
CLIC4Q9Y696 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CLIC4Q9Y696 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.62■■□□□ 1.21
CLIC4Q9Y696 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.62■■□□□ 1.21
CLIC4Q9Y696 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLIC4Q9Y696 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.61■■□□□ 1.21
CLIC4Q9Y696 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
CLIC4Q9Y696 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLIC4Q9Y696 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLIC4Q9Y696 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CLIC4Q9Y696 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 MIPEPP3-201ENST00000412105 444 ntBASIC22.6■■□□□ 1.21
CLIC4Q9Y696 AC083906.2-201ENST00000511578 360 ntBASIC22.6■■□□□ 1.21
CLIC4Q9Y696 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms