Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 AC079598.2-202ENST00000546624 1451 ntBASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 AP000525.1-201ENST00000608286 694 ntBASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SNX11Q9Y5W9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 UNC93B2-201ENST00000285383 730 ntBASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNX11Q9Y5W9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 AC073130.3-201ENST00000624389 2278 ntBASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 HLA-G-202ENST00000376815 851 ntBASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 HLA-G-203ENST00000376818 1127 ntBASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 AC145285.6-201ENST00000604632 637 ntBASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNX11Q9Y5W9 AC121338.2-201ENST00000622535 1744 ntBASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 MIR1238-201ENST00000408483 83 ntBASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 KRT18P35-201ENST00000510488 1269 ntBASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 AC005363.2-201ENST00000618631 242 ntBASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.65■□□□□ 0.74
SNX11Q9Y5W9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SNX11Q9Y5W9 PLK5-205ENST00000642079 1969 ntBASIC19.64■□□□□ 0.74
SNX11Q9Y5W9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 AC092865.7-201ENST00000641832 219 ntBASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX11Q9Y5W9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX11Q9Y5W9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms