Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 AC012618.2-201ENST00000428058 849 ntBASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA6Q9Y5G7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGA6Q9Y5G7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 AC020907.5-201ENST00000624372 1936 ntBASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA6Q9Y5G7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA6Q9Y5G7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA6Q9Y5G7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA6Q9Y5G7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHGA6Q9Y5G7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PCDHGA6Q9Y5G7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PCDHGA6Q9Y5G7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA6Q9Y5G7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
PCDHGA6Q9Y5G7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA6Q9Y5G7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHGA6Q9Y5G7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 SNORA78-201ENST00000459373 127 ntBASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 AC233702.5-201ENST00000584107 538 ntBASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 AC124016.1-201ENST00000609552 612 ntBASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDHGA6Q9Y5G7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA6Q9Y5G7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA6Q9Y5G7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA6Q9Y5G7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA6Q9Y5G7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA6Q9Y5G7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGA6Q9Y5G7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGA6Q9Y5G7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms