Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC073130.3-201ENST00000624389 2278 ntBASIC20.06■□□□□ 0.8
PCDHGC4Q9Y5F7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGC4Q9Y5F7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGC4Q9Y5F7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGC4Q9Y5F7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 AC069544.1-201ENST00000609399 999 ntBASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 ITM2C-210ENST00000620962 501 ntBASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGC4Q9Y5F7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 TCF3P1-201ENST00000423021 1937 ntBASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 KRT18P29-201ENST00000397031 1267 ntBASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGC4Q9Y5F7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 PHGDH-210ENST00000641115 1638 ntBASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGC4Q9Y5F7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC4Q9Y5F7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDHGC4Q9Y5F7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC4Q9Y5F7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC4Q9Y5F7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC4Q9Y5F7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC4Q9Y5F7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC4Q9Y5F7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC4Q9Y5F7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC4Q9Y5F7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC4Q9Y5F7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC4Q9Y5F7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC4Q9Y5F7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC4Q9Y5F7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.01■□□□□ 0.79
PCDHGC4Q9Y5F7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PCDHGC4Q9Y5F7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHGC4Q9Y5F7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC4Q9Y5F7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms