Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 AC012618.2-201ENST00000428058 849 ntBASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB9Q9Y5E1 LINC01521-201ENST00000504184 1943 ntBASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 RPS2P55-201ENST00000397318 883 ntBASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 AC107956.1-201ENST00000494359 873 ntBASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB9Q9Y5E1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHB9Q9Y5E1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHB9Q9Y5E1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHB9Q9Y5E1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 AC233702.5-201ENST00000584107 538 ntBASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 AC133561.5-201ENST00000635547 218 ntBASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCDHB9Q9Y5E1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 TSPY7P-201ENST00000431358 1114 ntBASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCDHB9Q9Y5E1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PCDHB9Q9Y5E1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms