Protein–RNA interactions for Protein: Q9Y5A7

NUB1, NEDD8 ultimate buster 1, humanhuman

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1Q9Y5A7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.58■■□□□ 1.04
NUB1Q9Y5A7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 RPS2P4-201ENST00000476944 856 ntBASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 MTDHP1-201ENST00000605323 784 ntBASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.57■■□□□ 1.04
NUB1Q9Y5A7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 AL023875.1-201ENST00000640777 796 ntBASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.56■■□□□ 1.04
NUB1Q9Y5A7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 HLA-G-202ENST00000376815 851 ntBASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 HLA-G-203ENST00000376818 1127 ntBASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 AC239809.2-201ENST00000415381 517 ntBASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
NUB1Q9Y5A7 AC073130.3-201ENST00000624389 2278 ntBASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 AC112907.3-201ENST00000577781 2400 ntBASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 AC008550.1-201ENST00000511500 884 ntBASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NUB1Q9Y5A7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms