Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AL032819.2-201ENST00000624543 2162 ntBASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
UBE2D4Q9Y2X8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBE2D4Q9Y2X8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 TERF1P2-201ENST00000583350 1212 ntBASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBE2D4Q9Y2X8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBE2D4Q9Y2X8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.77□□□□□ -0.2
UBE2D4Q9Y2X8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2D4Q9Y2X8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2D4Q9Y2X8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2D4Q9Y2X8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
UBE2D4Q9Y2X8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBE2D4Q9Y2X8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms