Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HIF3AQ9Y2N7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.91■□□□□ 0.46
HIF3AQ9Y2N7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.91■□□□□ 0.46
HIF3AQ9Y2N7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIF3AQ9Y2N7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HIF3AQ9Y2N7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.91■□□□□ 0.46
HIF3AQ9Y2N7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIF3AQ9Y2N7 TREX1-205ENST00000625293 1783 ntBASIC17.91■□□□□ 0.46
HIF3AQ9Y2N7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HIF3AQ9Y2N7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 AP001271.2-201ENST00000624018 1556 ntBASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.9■□□□□ 0.46
HIF3AQ9Y2N7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HIF3AQ9Y2N7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HIF3AQ9Y2N7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 CDCA4P2-201ENST00000441182 718 ntBASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 IKBKGP1-201ENST00000612193 1073 ntBASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.88■□□□□ 0.45
HIF3AQ9Y2N7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 LSM12P1-201ENST00000411836 588 ntBASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 AL050303.2-201ENST00000619798 666 ntBASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HIF3AQ9Y2N7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms